RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 MBTPS1Q14703 1052 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 SYCP1Q15431 976 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 TMC6Q7Z403 805 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 NT5DC4Q86YG4 428 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 PLEKHO2Q8TD55 490 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 CACTINQ8WUQ7 758 aaKnown RBP20.13■□□□□ 0.81
SSBP4-212ENST00000601919 NUP58Q9BVL2 599 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 PPP1R12CQ9BZL4 782 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 MMRN2Q9H8L6 949 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 SNTG2Q9NY99 539 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 IPPQ9Y573 584 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 ZNF623O75123 536 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 GCLMP48507 274 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 EXOC3L4Q17RC7 722 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 DUOXA2Q1HG44 320 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 PLEKHG4Q58EX7 1191 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 C1orf220Q5T0J3 134 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 PGBD4Q96DM1 585 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 PPP1R9BQ96SB3 815 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 ADAM2Q99965 735 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 TMX1Q9H3N1 280 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 NXF3Q9H4D5 531 aaKnown RBP20.12■□□□□ 0.81
SSBP4-212ENST00000601919 C1orf112Q9NSG2 853 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 DERAQ9Y315 318 aa20.12■□□□□ 0.81
SSBP4-212ENST00000601919 A0A0U1RQF3 1178 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 TTC26A0AVF1 554 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 KIAA0355O15063 1070 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 NBNO60934 754 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 TNNC2P02585 160 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 ITGA4P13612 1032 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 CYP2C18P33260 490 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 PPP3CAQ08209 521 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 SLC10A6Q3KNW5 377 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 PPFIBP1Q86W92 1011 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 TMEM192Q8IY95 271 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 SPC24Q8NBT2 197 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 ANKRD36BP1Q96IX9 119 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 POP1Q99575 1024 aaKnown RBP20.11■□□□□ 0.81
SSBP4-212ENST00000601919 OSBPL7Q9BZF2 842 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 TMEM117Q9H0C3 514 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 RGS18Q9NS28 235 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
SSBP4-212ENST00000601919 GCNT4Q9P109 453 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 PARP2Q9UGN5 583 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 C2CD2Q9Y426 696 aa20.11■□□□□ 0.81
SSBP4-212ENST00000601919 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.11■□□□□ 0.81
SSBP4-212ENST00000601919 UMODL1Q5DID0 1318 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 LACTBL1A8MY62 500 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 RECQL4O94761 1208 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 TIMP1P01033 207 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 CXCL10P02778 98 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 TMEM191BP0C7N4 346 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 CCL23P55773 120 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 CBWD6Q4V339 395 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 CBWD3Q5JTY5 395 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 CBWD5Q5RIA9 395 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 SLC24A5Q71RS6 500 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 MRPL10Q7Z7H8 261 aaKnown RBP20.1■□□□□ 0.81
SSBP4-212ENST00000601919 SMG8Q8ND04 991 aaKnown RBP20.1■□□□□ 0.81
SSBP4-212ENST00000601919 NEK11Q8NG66 645 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 SNX27Q96L92 541 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 APOL6Q9BWW8 343 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 WNT8AQ9H1J5 351 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 UBN1Q9NPG3 1134 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 PRDM5Q9NQX1 630 aaPredicted RBP20.1■□□□□ 0.81
SSBP4-212ENST00000601919 PRKAG2Q9UGJ0 569 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 DAAM1Q9Y4D1 1078 aa20.1■□□□□ 0.81
SSBP4-212ENST00000601919 TRIP11Q15643 1979 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 XPOTO43592 962 aaKnown RBP20.09■□□□□ 0.81
SSBP4-212ENST00000601919 PHACTR2O75167 634 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 PTMAP06454 111 aaKnown RBP20.09■□□□□ 0.81
SSBP4-212ENST00000601919 RAG1P15918 1043 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 TRIM21P19474 475 aaKnown RBP20.09■□□□□ 0.81
SSBP4-212ENST00000601919 GSDMDP57764 484 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 TFAMQ00059 246 aaKnown RBP20.09■□□□□ 0.81
SSBP4-212ENST00000601919 BIRC3Q13489 604 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 TMEM132DQ14C87 1099 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 ZACNQ401N2 412 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 FIGNQ5HY92 759 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 SV2AQ7L0J3 742 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 FBXL13Q8NEE6 735 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 CRACR2AQ9BSW2 395 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 TSPYL2Q9H2G4 693 aaPredicted RBP20.09■□□□□ 0.81
SSBP4-212ENST00000601919 PLCB1Q9NQ66 1216 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 SIK3Q9Y2K2 1263 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 GIT1Q9Y2X7 761 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 COQ4Q9Y3A0 265 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 HES2Q9Y543 173 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 SCN5AQ14524 2016 aa20.09■□□□□ 0.81
SSBP4-212ENST00000601919 PDCD11Q14690 1871 aaKnown RBP20.08■□□□□ 0.81
SSBP4-212ENST00000601919 MGEA5O60502 916 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 EOMESO95936 686 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 C4BPAP04003 597 aaKnown RBP20.08■□□□□ 0.81
SSBP4-212ENST00000601919 AKAP5P24588 427 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 WNT7BP56706 349 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 JADE1Q6IE81 842 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 C15orf39Q6ZRI6 1047 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 TMEM199Q8N511 208 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 CCDC150Q8NCX0 1101 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 EHBP1Q8NDI1 1231 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms