RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 KMT5BQ4FZB7 885 aa21.91■■□□□ 1.1
SSBP4-210ENST00000601444 XKR4Q5GH76 650 aa21.91■■□□□ 1.1
SSBP4-210ENST00000601444 TCEAL5Q5H9L2 206 aa21.91■■□□□ 1.1
SSBP4-210ENST00000601444 SNX27Q96L92 541 aa21.91■■□□□ 1.1
SSBP4-210ENST00000601444 PPP1R10Q96QC0 940 aaKnown RBP21.91■■□□□ 1.1
SSBP4-210ENST00000601444 VN1R3Q9BXE9 311 aa21.91■■□□□ 1.1
SSBP4-210ENST00000601444 STYXL1Q9Y6J8 313 aa21.91■■□□□ 1.1
SSBP4-210ENST00000601444 PRRC2BQ5JSZ5 2229 aaKnown RBP21.9■■□□□ 1.1
SSBP4-210ENST00000601444 OGTO15294 1046 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 CXCL8P10145 99 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 IGFBP6P24592 240 aaPredicted RBP21.9■■□□□ 1.1
SSBP4-210ENST00000601444 UBE3AQ05086 875 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 ALCAMQ13740 583 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 ADGRD2Q7Z7M1 963 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 SYCP3Q8IZU3 236 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 TMEM130Q8N3G9 435 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 ZSWIM2Q8NEG5 633 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 MICAL1Q8TDZ2 1067 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 TMEM169Q96HH4 297 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 TLR9Q9NR96 1032 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 TOPORSQ9NS56 1045 aaPredicted RBP21.9■■□□□ 1.1
SSBP4-210ENST00000601444 EXOC7Q9UPT5 735 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 LZTS1Q9Y250 596 aa21.9■■□□□ 1.1
SSBP4-210ENST00000601444 NR1I2O75469 434 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 RPN1P04843 607 aaKnown RBP21.89■■□□□ 1.09
SSBP4-210ENST00000601444 CLTAP09496 248 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 ACOT2P49753 483 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 FAM160A1Q05DH4 1040 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 SOX4Q06945 474 aaPredicted RBP21.89■■□□□ 1.09
SSBP4-210ENST00000601444 SPAG1Q07617 926 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 DPYDQ12882 1025 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 STK4Q13043 487 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 TUSC3Q13454 348 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 ENOX2Q16206 610 aaKnown RBP21.89■■□□□ 1.09
SSBP4-210ENST00000601444 ZNF507Q8TCN5 953 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 SCFD1Q8WVM8 642 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 POMGNT1Q8WZA1 660 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 NSUN3Q9H649 340 aaKnown RBP21.89■■□□□ 1.09
SSBP4-210ENST00000601444 GOLGA2P5Q9HBQ8 144 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 CNTN3Q9P232 1028 aa21.89■■□□□ 1.09
SSBP4-210ENST00000601444 PUF60Q9UHX1 559 aaKnown RBP21.89■■□□□ 1.09
SSBP4-210ENST00000601444 ATG2AQ2TAZ0 1938 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 FSCN2O14926 492 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 GTF2F1P35269 517 aaKnown RBP eCLIP21.88■■□□□ 1.09
SSBP4-210ENST00000601444 SKIV2LQ15477 1246 aaKnown RBP21.88■■□□□ 1.09
SSBP4-210ENST00000601444 TIGD5Q53EQ6 642 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 PLPP4Q5VZY2 271 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 SLFN12LQ6IEE8 588 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 TAS1R1Q7RTX1 841 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 DDX53Q86TM3 631 aaKnown RBP21.88■■□□□ 1.09
SSBP4-210ENST00000601444 NELFCDQ8IXH7 590 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 VPS52Q8N1B4 723 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 TMEM87AQ8NBN3 555 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 C18orf25Q96B23 403 aaPredicted RBP21.88■■□□□ 1.09
SSBP4-210ENST00000601444 TCF25Q9BQ70 676 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 TMEM206Q9H813 350 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 EXOC1Q9NV70 894 aa21.88■■□□□ 1.09
SSBP4-210ENST00000601444 CPSF3Q9UKF6 684 aaKnown RBP21.88■■□□□ 1.09
SSBP4-210ENST00000601444 AGO2Q9UKV8 859 aaKnown RBP21.88■■□□□ 1.09
SSBP4-210ENST00000601444 TDRD15B5MCY1 1934 aaKnown RBP21.88■■□□□ 1.09
SSBP4-210ENST00000601444 XIRP2A4UGR9 3374 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 TTC26A0AVF1 554 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 LACTBL1A8MY62 500 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 EIF3DO15371 548 aaKnown RBP eCLIP21.87■■□□□ 1.09
SSBP4-210ENST00000601444 MYL1P05976 194 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 KCNE1P15382 129 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 CRELD2Q6UXH1 353 aaPredicted RBP21.87■■□□□ 1.09
SSBP4-210ENST00000601444 STXBP4Q6ZWJ1 553 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 TMC7Q7Z402 723 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 RBM23Q86U06 439 aaKnown RBP21.87■■□□□ 1.09
SSBP4-210ENST00000601444 KIAA0895Q8NCT3 520 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 HASPINQ8TF76 798 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 AUTS2Q8WXX7 1259 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 SAAL1Q96ER3 474 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 CBWD1Q9BRT8 395 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 PCIF1Q9H4Z3 704 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 ENTPD7Q9NQZ7 604 aa21.87■■□□□ 1.09
SSBP4-210ENST00000601444 HIDE1A8MVS5 230 aa21.86■■□□□ 1.09
SSBP4-210ENST00000601444 TGFB1I1O43294 461 aa21.86■■□□□ 1.09
SSBP4-210ENST00000601444 CLCNKBP51801 687 aa21.86■■□□□ 1.09
SSBP4-210ENST00000601444 HYAL1Q12794 435 aa21.86■■□□□ 1.09
SSBP4-210ENST00000601444 PNOCQ13519 176 aa21.86■■□□□ 1.09
SSBP4-210ENST00000601444 HSP90AA2PQ14568 343 aaPredicted RBP21.86■■□□□ 1.09
SSBP4-210ENST00000601444 POSTNQ15063 836 aa21.86■■□□□ 1.09
SSBP4-210ENST00000601444 ERCC4Q92889 916 aaPredicted RBP21.86■■□□□ 1.09
SSBP4-210ENST00000601444 FAM212AQ96EL1 285 aa21.86■■□□□ 1.09
SSBP4-210ENST00000601444 COLEC11Q9BWP8 271 aa21.86■■□□□ 1.09
SSBP4-210ENST00000601444 IGFLR1Q9H665 355 aa21.86■■□□□ 1.09
SSBP4-210ENST00000601444 RPF1Q9H9Y2 349 aaKnown RBP21.86■■□□□ 1.09
SSBP4-210ENST00000601444 GOLGA8IPA6NC78 632 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 GOLGA8JA6NMD2 632 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 PER2O15055 1255 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 PRPF40AO75400 957 aaKnown RBP21.85■■□□□ 1.09
SSBP4-210ENST00000601444 KIF4AO95239 1232 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 EFEMP2O95967 443 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 KYAT1Q16773 422 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 KANK3Q6NY19 840 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 FAM213AQ9BRX8 229 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 GPR62Q9BZJ7 368 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 ZBP1Q9H171 429 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms