RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 HP1BP3Q5SSJ5 553 aaPredicted RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 SDE2Q6IQ49 451 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 TAF2Q6P1X5 1199 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 XRRA1Q6P2D8 792 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 METTL7BQ6UX53 244 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 FAM43BQ6ZT52 329 aaPredicted RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 CYFIP1Q7L576 1253 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 HOMER1Q86YM7 354 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 SMARCC2Q8TAQ2 1214 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 CLP1Q92989 425 aaKnown RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 CCDC136Q96JN2 1154 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 CDHR1Q96JP9 859 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 IRF2BPLQ9H1B7 796 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 CLEC4MQ9H2X3 399 aaPredicted RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 PIF1Q9H611 641 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 SETD4Q9NVD3 440 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 TMA7Q9Y2S6 64 aaKnown RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 COL4A4P53420 1690 aaPredicted RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 PTPRSQ13332 1948 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 A0A096LPE4 126 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 A0A1W2PPZ6 126 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 FSD2A1L4K1 749 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 M0QZ92 97 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 IFIT3O14879 490 aaKnown RBP6.37□□□□□ -1.39
DNMT1-220ENST00000589351 MAFGO15525 162 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 STAG3L1P0CL83 205 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 BUD31P41223 144 aaPredicted RBP6.37□□□□□ -1.39
DNMT1-220ENST00000589351 FGD1P98174 961 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 SP2Q02086 613 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 ZP2Q05996 745 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 SMAD2Q15796 467 aaKnown RBP6.37□□□□□ -1.39
DNMT1-220ENST00000589351 TCTN1Q2MV58 587 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 UTP14CQ5TAP6 766 aaKnown RBP6.37□□□□□ -1.39
DNMT1-220ENST00000589351 CATIPQ7Z7H3 387 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 RALYLQ86SE5 291 aaKnown RBP6.37□□□□□ -1.39
DNMT1-220ENST00000589351 RPAINQ86UA6 219 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 ZSWIM9Q86XI8 627 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 LRRC56Q8IYG6 542 aaPredicted RBP6.37□□□□□ -1.39
DNMT1-220ENST00000589351 SNX29Q8TEQ0 813 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 RUFY2Q8WXA3 655 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 P2RX5Q93086 422 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 MTMR8Q96EF0 704 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 PIGSQ96S52 555 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 SENP7Q9BQF6 1050 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 TRIM56Q9BRZ2 755 aaKnown RBP6.37□□□□□ -1.39
DNMT1-220ENST00000589351 FTHL17Q9BXU8 183 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 RIOX1Q9H6W3 641 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 METTL14Q9HCE5 456 aaKnown RBP6.37□□□□□ -1.39
DNMT1-220ENST00000589351 FAM53CQ9NYF3 392 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 RTEL1Q9NZ71 1219 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 CRIM1Q9NZV1 1036 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 MAD2L2Q9UI95 211 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 CD207Q9UJ71 328 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 POLIQ9UNA4 740 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 SQORQ9Y6N5 450 aa6.37□□□□□ -1.39
DNMT1-220ENST00000589351 ADGRA3Q8IWK6 1321 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 RRN3P2A6NIE6 340 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 STXBP3O00186 592 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 ENPP3O14638 875 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 MBTPS2O43462 519 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 HOXC8P31273 242 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 KIF5BP33176 963 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 EIF1AXP47813 144 aaKnown RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 NDUFV1P49821 464 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 GNAQP50148 359 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 NHLH1Q02575 133 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 HYAL1Q12794 435 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 SMAD4Q13485 552 aaKnown RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 WTAPQ15007 396 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 IFI16Q16666 785 aaKnown RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 SPRED3Q2MJR0 410 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 HERC4Q5GLZ8 1057 aaPredicted RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 ODR4Q5SWX8 454 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 CCDC181Q5TID7 509 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 PCNX4Q63HM2 1172 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 BMP8AQ7Z5Y6 402 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 CHD1LQ86WJ1 897 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 SUGP1Q8IWZ8 645 aaKnown RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 ZSCAN18Q8TBC5 510 aaPredicted RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 HELQQ8TDG4 1101 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 SEPT1Q8WYJ6 367 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 EDAQ92838 391 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 GLG1Q92896 1179 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 KCNB2Q92953 911 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 RRP36Q96EU6 259 aaKnown RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 SGSM3Q96HU1 749 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 INPP4AQ96PE3 977 aaPredicted RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 GPR20Q99678 358 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 CORO1BQ9BR76 489 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 LZTS2Q9BRK4 669 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 SMARCAD1Q9H4L7 1026 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 EHMT1Q9H9B1 1298 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 ERAP1Q9NZ08 941 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 SEC63Q9UGP8 760 aaKnown RBP6.36□□□□□ -1.39
DNMT1-220ENST00000589351 MICAL3Q7RTP6 2002 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 KAT6AQ92794 2004 aa6.36□□□□□ -1.39
DNMT1-220ENST00000589351 RALGAPA2Q2PPJ7 1873 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 GRM6O15303 877 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 PEX14O75381 377 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms