RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 HSPBP1Q9NZL4 362 aa16.9■□□□□ 0.3
GHDC-209ENST00000588762 CPSF3Q9UKF6 684 aaKnown RBP16.9■□□□□ 0.3
GHDC-209ENST00000588762 GOLGA8IPA6NC78 632 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 GOLGA8JA6NMD2 632 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 PTGESO14684 152 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 BMPR1AP36894 532 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 POU5F1Q01860 360 aaKnown RBP16.89■□□□□ 0.29
GHDC-209ENST00000588762 ENOX2Q16206 610 aaKnown RBP16.89■□□□□ 0.29
GHDC-209ENST00000588762 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 EPC2Q52LR7 807 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 ALKAL1Q6UXT8 129 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 ZNF280BQ86YH2 543 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 CD302Q8IX05 232 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 C12orf56Q8IXR9 622 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 COLGALT1Q8NBJ5 622 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 GSTCDQ8NEC7 633 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 FBXO22Q8NEZ5 403 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 PLVAPQ9BX97 442 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 NRDE2Q9H7Z3 1164 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 CERS4Q9HA82 394 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 MIOSQ9NXC5 875 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 CNTN3Q9P232 1028 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 HCSTQ9UBK5 93 aa16.89■□□□□ 0.29
GHDC-209ENST00000588762 SMIM28A0A1B0GU29 152 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 TTC26A0AVF1 554 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 ZNF233A6NK53 670 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
GHDC-209ENST00000588762 PSMA7O14818 248 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 DDHD2O94830 711 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 RB1P06400 928 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 KCNE1P15382 129 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 BCAR1P56945 870 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 XKR4Q5GH76 650 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 GLRA4Q5JXX5 417 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 CCDC183Q5T5S1 534 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 KCNT2Q6UVM3 1135 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 ADSSL1Q8N142 457 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 XXYLT1Q8NBI6 393 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 SYAP1Q96A49 352 aaPredicted RBP16.88■□□□□ 0.29
GHDC-209ENST00000588762 TSPAN18Q96SJ8 248 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 TSG101Q99816 390 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 TMEM175Q9BSA9 504 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 C11orf84Q9BUA3 381 aaPredicted RBP16.88■□□□□ 0.29
GHDC-209ENST00000588762 TTYH1Q9H313 450 aaPredicted RBP16.88■□□□□ 0.29
GHDC-209ENST00000588762 SEMA6BQ9H3T3 888 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 SLC38A7Q9NVC3 462 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 RBAKQ9NYW8 714 aaPredicted RBP16.88■□□□□ 0.29
GHDC-209ENST00000588762 PLAGL2Q9UPG8 496 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 TRAF3IP3Q9Y228 551 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 PLXNA4Q9HCM2 1894 aa16.88■□□□□ 0.29
GHDC-209ENST00000588762 LACTBL1A8MY62 500 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 EXOC3O60645 756 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 IL18RAPO95256 599 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 NR3C1P04150 777 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 ALDH2P05091 517 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 LINC00271P0C7V0 271 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 RPL13P26373 211 aaKnown RBP16.87■□□□□ 0.29
GHDC-209ENST00000588762 PPM1AP35813 382 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 TUSC3Q13454 348 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 CRELD2Q6UXH1 353 aaPredicted RBP16.87■□□□□ 0.29
GHDC-209ENST00000588762 SPRED2Q7Z698 418 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 SLC9A9Q8IVB4 645 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 P2RX5Q93086 422 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 DHTKD1Q96HY7 919 aaPredicted RBP16.87■□□□□ 0.29
GHDC-209ENST00000588762 FAM161BQ96MY7 647 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 PPP1R10Q96QC0 940 aaKnown RBP16.87■□□□□ 0.29
GHDC-209ENST00000588762 CXCL16Q9H2A7 254 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 ASB7Q9H672 318 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 SPG21Q9NZD8 308 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 DNAJB4Q9UDY4 337 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 FAN1Q9Y2M0 1017 aa16.87■□□□□ 0.29
GHDC-209ENST00000588762 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.87■□□□□ 0.29
GHDC-209ENST00000588762 COL4A4P53420 1690 aaPredicted RBP16.87■□□□□ 0.29
GHDC-209ENST00000588762 CHD7Q9P2D1 2997 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 C5orf67F2Z3F1 127 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 MEFVO15553 781 aaPredicted RBP16.86■□□□□ 0.29
GHDC-209ENST00000588762 XPOTO43592 962 aaKnown RBP16.86■□□□□ 0.29
GHDC-209ENST00000588762 ADRB2P07550 413 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 BMP6P22004 513 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 OR1G1P47890 313 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 DSC1Q08554 894 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 MYBPC2Q14324 1141 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 SNRNP35Q16560 246 aaKnown RBP16.86■□□□□ 0.29
GHDC-209ENST00000588762 CENPPQ6IPU0 288 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 BRSK2Q8IWQ3 736 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 COLGALT2Q8IYK4 626 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 DEFB123Q8N688 67 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 ZSWIM2Q8NEG5 633 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 TMEM174Q8WUU8 243 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 KIF12Q96FN5 646 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 DERAQ9Y315 318 aa16.86■□□□□ 0.29
GHDC-209ENST00000588762 TRANK1O15050 2925 aa16.85■□□□□ 0.29
GHDC-209ENST00000588762 B4GALT3O60512 393 aa16.85■□□□□ 0.29
GHDC-209ENST00000588762 GALTP07902 379 aa16.85■□□□□ 0.29
GHDC-209ENST00000588762 NR2F2P24468 414 aa16.85■□□□□ 0.29
GHDC-209ENST00000588762 PBX3P40426 434 aa16.85■□□□□ 0.29
GHDC-209ENST00000588762 SLC11A1P49279 550 aa16.85■□□□□ 0.29
GHDC-209ENST00000588762 KRT17Q04695 432 aa16.85■□□□□ 0.29
GHDC-209ENST00000588762 LRRC63Q05C16 580 aa16.85■□□□□ 0.29
GHDC-209ENST00000588762 GPM6BQ13491 265 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms