RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 SFR1Q86XK3 245 aa28.88■■■□□ 2.21
PPP4R1-204ENST00000577393 PPP1R10Q96QC0 940 aaKnown RBP28.88■■■□□ 2.21
PPP4R1-204ENST00000577393 HAPLN2Q9GZV7 340 aa28.88■■■□□ 2.21
PPP4R1-204ENST00000577393 MRPL17Q9NRX2 175 aaKnown RBP28.88■■■□□ 2.21
PPP4R1-204ENST00000577393 RCOR1Q9UKL0 485 aa28.88■■■□□ 2.21
PPP4R1-204ENST00000577393 ADAM28Q9UKQ2 775 aa28.88■■■□□ 2.21
PPP4R1-204ENST00000577393 TRIP11Q15643 1979 aa28.88■■■□□ 2.21
PPP4R1-204ENST00000577393 SMIM28A0A1B0GU29 152 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 TNFRSF10AO00220 468 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 LILRB3O75022 631 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 TADA2AO75478 443 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 SRGAP2BP0DMP2 458 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 MATR3P43243 847 aaKnown RBP eCLIP28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 LIG4P49917 911 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 BECN1Q14457 450 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 E2F4Q16254 413 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 XKR4Q5GH76 650 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 FUT10Q6P4F1 479 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 SMRP1Q8NCR6 262 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 GPR62Q9BZJ7 368 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 HCFC2Q9Y5Z7 792 aa28.87■■■□□ 2.21
PPP4R1-204ENST00000577393 C2CD2LO14523 706 aa28.86■■■□□ 2.21
PPP4R1-204ENST00000577393 HNRNPDLO14979 420 aaKnown RBP28.86■■■□□ 2.21
PPP4R1-204ENST00000577393 PIGRP01833 764 aa28.86■■■□□ 2.21
PPP4R1-204ENST00000577393 URODP06132 367 aa28.86■■■□□ 2.21
PPP4R1-204ENST00000577393 ABCD1P33897 745 aa28.86■■■□□ 2.21
PPP4R1-204ENST00000577393 SEZ6Q53EL9 994 aa28.86■■■□□ 2.21
PPP4R1-204ENST00000577393 ZC2HC1CQ53FD0 456 aaPredicted RBP28.86■■■□□ 2.21
PPP4R1-204ENST00000577393 SNX27Q96L92 541 aa28.86■■■□□ 2.21
PPP4R1-204ENST00000577393 ST6GALNAC4Q9H4F1 302 aa28.86■■■□□ 2.21
PPP4R1-204ENST00000577393 GAP43P17677 238 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 SMAD2Q15796 467 aaKnown RBP28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 ANKRD54Q6NXT1 300 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 ZNF720Q7Z2F6 126 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 MAP4K3Q8IVH8 894 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 HASPINQ8TF76 798 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 STAMQ92783 540 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 CASP10Q92851 521 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 DHX58Q96C10 678 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 KLHL5Q96PQ7 755 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 EMILIN2Q9BXX0 1053 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 SEL1LQ9UBV2 794 aa28.85■■■□□ 2.21
PPP4R1-204ENST00000577393 MEFVO15553 781 aaPredicted RBP28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 KIF4AO95239 1232 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 CNPP09543 421 aaKnown RBP28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 IDEP14735 1019 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 GLUD2P49448 558 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 KIAA0319Q5VV43 1072 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 IQUBQ8NA54 791 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 CHAMP1Q96JM3 812 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 ZMAT2Q96NC0 199 aaKnown RBP28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 CUEDC2Q9H467 287 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 CHST7Q9NS84 486 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 SSX2IPQ9Y2D8 614 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 MUC3AQ02505 3323 aa28.84■■■□□ 2.21
PPP4R1-204ENST00000577393 KCNE1P15382 129 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 DSG1Q02413 1049 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 SLC10A6Q3KNW5 377 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 KIAA1841Q6NSI8 718 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 SLC39A4Q6P5W5 647 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 SYCE2Q6PIF2 218 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 SLC22A17Q8WUG5 538 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 B3GALT6Q96L58 329 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 TNMDQ9H2S6 317 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 MRPL44Q9H9J2 332 aaKnown RBP28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 GOLGA2P5Q9HBQ8 144 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 KBTBD4Q9NVX7 518 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 TBC1D7Q9P0N9 293 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 CNTN3Q9P232 1028 aa28.83■■■□□ 2.21
PPP4R1-204ENST00000577393 FRMD3A2A2Y4 597 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 KLRC2P26717 231 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 SOX4Q06945 474 aaPredicted RBP28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 USP41Q3LFD5 358 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 HERC4Q5GLZ8 1057 aaPredicted RBP28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 RESP18Q5W5W9 173 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 PPFIBP1Q86W92 1011 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 STRA6Q9BX79 667 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 S1PR5Q9H228 398 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 SLC38A7Q9NVC3 462 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 PANK4Q9NVE7 773 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 FAM13BQ9NYF5 915 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 USP15Q9Y4E8 981 aaPredicted RBP28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 SF3B1O75533 1304 aaKnown RBP eCLIP28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 CITO14578 2027 aa28.82■■■□□ 2.2
PPP4R1-204ENST00000577393 POLR2DO15514 142 aaKnown RBP28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 PPP1R37O75864 691 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 CLTAP09496 248 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 EPCAMP16422 314 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 HOXB8P17481 243 aaPredicted RBP28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 CLCNKBP51801 687 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 HVCN1Q96D96 273 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 UROC1Q96N76 676 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 APOL5Q9BWW9 433 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 LRRC27Q9C0I9 530 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 CD320Q9NPF0 282 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 PRKAG3Q9UGI9 489 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 C5orf42Q9H799 3197 aa28.81■■■□□ 2.2
PPP4R1-204ENST00000577393 A0A0B4J269 797 aa28.8■■■□□ 2.2
PPP4R1-204ENST00000577393 ANKRD63C9JTQ0 380 aa28.8■■■□□ 2.2
PPP4R1-204ENST00000577393 OGTO15294 1046 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms