RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	PPAT	Q06203	517 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	MAPK7	Q13164	816 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	BLMH	Q13867	455 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	UGCG	Q16739	394 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	ARHGAP22	Q7Z5H3	698 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	ERO1B	Q86YB8	467 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	LRRC34	Q8IZ02	419 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	ANKRD13A	Q8IZ07	590 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	EPAS1	Q99814	870 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	ELAC2	Q9BQ52	826 aa	Known RBP	12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	YIPF3	Q9GZM5	350 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	PARVG	Q9HBI0	331 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	LRRC4C	Q9HCJ2	640 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	BTBD7	Q9P203	1132 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	AGAP1	Q9UPQ3	857 aa		12.85	□□□□□ -0.35
SPG7-222	ENST00000569820	ARHGEF35	A5YM69	484 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	KRIT1	O00522	736 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	PDXK	O00764	312 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	EIF3D	O15371	548 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	GNA14	O95837	355 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	QARS	P47897	775 aa	Known RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	ALDH5A1	P51649	535 aa	Predicted RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	KRT76	Q01546	638 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	KCNA1	Q09470	495 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	IFI16	Q16666	785 aa	Known RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	MTHFD1L	Q6UB35	978 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	GADL1	Q6ZQY3	521 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	RINL	Q6ZS11	566 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	TRIM59	Q8IWR1	403 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	DAW1	Q8N136	415 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	PACSIN1	Q9BY11	444 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	NSRP1	Q9H0G5	558 aa	Known RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	ABCF3	Q9NUQ8	709 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	SEL1L	Q9UBV2	794 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	AMACR	Q9UHK6	382 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	DBR1	Q9UK59	544 aa	Known RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	NOC2L	Q9Y3T9	749 aa	Known RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820		A0A087X0T9	212 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	WDR64	B1ANS9	1081 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	FAM228B	P0C875	321 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	KCNA2	P16389	499 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	NR2F2	P24468	414 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	NMT1	P30419	496 aa	Known RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	RANBP1	P43487	201 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	JAK3	P52333	1124 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	ADAM9	Q13443	819 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	ILDR2	Q71H61	639 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	MYLK4	Q86YV6	388 aa	Predicted RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	MYCT1	Q8N699	235 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	CHST13	Q8NET6	341 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.84	□□□□□ -0.35	4e-12	■■■■□ 21.1
SPG7-222	ENST00000569820	SLITRK6	Q9H5Y7	841 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	FAM114A2	Q9NRY5	505 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	TYW1	Q9NV66	732 aa	Known RBP	12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	ATP8A1	Q9Y2Q0	1164 aa		12.84	□□□□□ -0.35
SPG7-222	ENST00000569820	UBOX5	O94941	541 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	VIM	P08670	466 aa	Known RBP	12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	SFN	P31947	248 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	MMP13	P45452	471 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	RARRES1	P49788	294 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	NCALD	P61601	193 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	KCNMA1	Q12791	1236 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	SPDYC	Q5MJ68	293 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	CHADL	Q6NUI6	762 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	PADI6	Q6TGC4	694 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	NLRX1	Q86UT6	975 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	INTS9	Q9NV88	658 aa	Known RBP	12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	ADAMTS1	Q9UHI8	967 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	KCNH4	Q9UQ05	1017 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	UTP11	Q9Y3A2	253 aa	Known RBP	12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	UBE4B	O95155	1302 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	GLTPD2	A6NH11	291 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	PDLIM1	O00151	329 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	TTI1	O43156	1089 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	TGFB1I1	O43294	461 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	HIP1R	O75146	1068 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	RARA	P10276	462 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	POLR2F	P61218	127 aa	Known RBP	12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	ARID5A	Q03989	594 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	RAPGEF1	Q13905	1077 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	ANKRD20A2	Q5SQ80	823 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	ANKRD20A1	Q5TYW2	823 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	ANKRD20A3	Q5VUR7	823 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	RIOX2	Q8IUF8	465 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	C4orf19	Q8IY42	314 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	PRCC	Q92733	491 aa	Predicted RBP	12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	FMO2	Q99518	471 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	SENP7	Q9BQF6	1050 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	DPH5	Q9H2P9	285 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	ECT2	Q9H8V3	914 aa		12.83	□□□□□ -0.36
SPG7-222	ENST00000569820	CXCL11	O14625	94 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	CETN3	O15182	167 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	CALU	O43852	315 aa	Predicted RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	STAM2	O75886	525 aa		12.82	□□□□□ -0.36

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