RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TNNC1P63316 161 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 LAMTOR4Q0VGL1 99 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 WDR44Q5JSH3 913 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 RASGEF1CQ8N431 466 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 GPRC5AQ8NFJ5 357 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 SCFD2Q8WU76 684 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 DDX1Q92499 740 aaKnown RBP19.5■□□□□ 0.71
SMPD3-211ENST00000568373 KRT12Q99456 494 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 SMARCAD1Q9H4L7 1026 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 PDGFCQ9NRA1 345 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 CTTNBP2NLQ9P2B4 639 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 CLDN3O15551 220 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 MSCO60682 206 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 KRT5P13647 590 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 PIK3CAP42336 1068 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 CCNA1P78396 465 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 BIRC3Q13489 604 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 LRRC71Q8N4P6 559 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 CGRRF1Q99675 332 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 MRPL4Q9BYD3 311 aaKnown RBP19.5■□□□□ 0.71
SMPD3-211ENST00000568373 NOC2LQ9Y3T9 749 aaKnown RBP19.5■□□□□ 0.71
SMPD3-211ENST00000568373 CNTNAP2Q9UHC6 1331 aa19.49■□□□□ 0.71
SMPD3-211ENST00000568373 H3BQF6 201 aa19.49■□□□□ 0.71
SMPD3-211ENST00000568373 VNN1O95497 513 aa19.49■□□□□ 0.71
SMPD3-211ENST00000568373 TMEM63BQ5T3F8 832 aa19.49■□□□□ 0.71
SMPD3-211ENST00000568373 C11orf63Q6NUN7 778 aa19.49■□□□□ 0.71
SMPD3-211ENST00000568373 ARMCX2Q7L311 632 aa19.49■□□□□ 0.71
SMPD3-211ENST00000568373 JPH2Q9BR39 696 aaPredicted RBP19.49■□□□□ 0.71
SMPD3-211ENST00000568373 ACBD3Q9H3P7 528 aa19.49■□□□□ 0.71
SMPD3-211ENST00000568373 ZNF408Q9H9D4 720 aa19.49■□□□□ 0.71
SMPD3-211ENST00000568373 DIS3Q9Y2L1 958 aaKnown RBP19.49■□□□□ 0.71
SMPD3-211ENST00000568373 A0A0U1RQG5 324 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-211ENST00000568373 TTLL13PA6NNM8 815 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 DDX3YO15523 660 aaKnown RBP19.48■□□□□ 0.71
SMPD3-211ENST00000568373 TOM1L1O75674 476 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 SRGAP2CP0DJJ0 459 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 ZBTB8OSQ8IWT0 167 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 RNF149Q8NC42 400 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 TRPC6Q9Y210 931 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 CLEC11AQ9Y240 323 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 SLC45A1Q9Y2W3 748 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 PDHXO00330 501 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 MTA2O94776 668 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 GLI1P08151 1106 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 CETPP11597 493 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 HARSP12081 509 aaKnown RBP19.48■□□□□ 0.71
SMPD3-211ENST00000568373 TERF2Q15554 542 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 IFT20Q8IY31 132 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 MS4A4AQ96JQ5 239 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 C2orf40Q9H1Z8 148 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 GDF3Q9NR23 364 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 PLXNA1Q9UIW2 1896 aa19.48■□□□□ 0.71
SMPD3-211ENST00000568373 POLR3GO15318 223 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-211ENST00000568373 FAM189A1O60320 539 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 HBP1O60381 514 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 HEXIM1O94992 359 aaKnown RBP19.47■□□□□ 0.71
SMPD3-211ENST00000568373 POTEJP0CG39 1038 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 MAPK6Q16659 721 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 ZNF792Q3KQV3 632 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 BRSK2Q8IWQ3 736 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 GDAP1L1Q96MZ0 367 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 ACO2Q99798 780 aaKnown RBP19.47■□□□□ 0.71
SMPD3-211ENST00000568373 TTC7AQ9ULT0 858 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-211ENST00000568373 HPCAL4Q9UM19 191 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 PLXNB2O15031 1838 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 PRKCBP05771 671 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 EPHB4P54760 987 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 SEZ6Q53EL9 994 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 MAP1SQ66K74 1059 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-211ENST00000568373 KLHL7Q8IXQ5 586 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 CARD9Q9H257 536 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 GTF3C4Q9UKN8 822 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 ALG6Q9Y672 507 aa19.47■□□□□ 0.71
SMPD3-211ENST00000568373 DCAF8L1A6NGE4 600 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 BTBD19C9JJ37 291 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 CCDC188H7C350 402 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 CYP1A2P05177 515 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 ADORA2AP29274 412 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 GTF2A2P52657 109 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 ARHGAP1Q07960 439 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 DCAF12L1Q5VU92 463 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 SPOPLQ6IQ16 392 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 ACAD10Q6JQN1 1059 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 EMBQ6PCB8 327 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 RHPN2Q8IUC4 686 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 OR5B17Q8NGF7 314 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 TRAPPC12Q8WVT3 735 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 TCHPQ9BT92 498 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 AP1M1Q9BXS5 423 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 ZCCHC17Q9NP64 241 aaKnown RBP19.46■□□□□ 0.71
SMPD3-211ENST00000568373 ERAP1Q9NZ08 941 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 PCDHB2Q9Y5E7 798 aa19.46■□□□□ 0.71
SMPD3-211ENST00000568373 CCL15-CCL14A0A0B4J2E2 113 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 KRIT1O00522 736 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 ATMINO43313 823 aaPredicted RBP19.45■□□□□ 0.7
SMPD3-211ENST00000568373 RAD51CO43502 376 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 BPIFB4P59827 614 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 GUCY2DQ02846 1103 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 GRM1Q13255 1194 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 CUL2Q13617 745 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms