RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PHAXQ9H814 394 aaKnown RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 DCLRE1BQ9H816 532 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 LIN7BQ9HAP6 207 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 METTL14Q9HCE5 456 aaKnown RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 KRT82Q9NSB4 513 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 ZDHHC18Q9NUE0 388 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 TXLNGQ9NUQ3 528 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 PTTG2Q9NZH5 202 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 SAMD15Q9P1V8 674 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 ARHGAP20Q9P2F6 1191 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 STOML1Q9UBI4 398 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 LRWD1Q9UFC0 647 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 DBNLQ9UJU6 430 aaKnown RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 CROTQ9UKG9 612 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 PNMA2Q9UL42 364 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 TTC7AQ9ULT0 858 aaPredicted RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 PA2G4Q9UQ80 394 aaKnown RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 XDHP47989 1333 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 MAP3K19Q56UN5 1328 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 IGSF1Q8N6C5 1336 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 NALCNQ8IZF0 1738 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 NWD1Q149M9 1564 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 SETD1BQ9UPS6 1966 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 E9PBE3 544 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 CCDC188H7C350 402 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 NCK2O43639 380 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 ASMTLO95671 621 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 PDHA1P08559 390 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 PDGFRBP09619 1106 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 HSPD1P10809 573 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 CDK4P11802 303 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 PORP16435 677 aaPredicted RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 PTPRAP18433 802 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 ITPKAP23677 461 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 GTF2H1P32780 548 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 CTNNA1P35221 906 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 CCT6AP40227 531 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 CCNFP41002 786 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 TXKP42681 527 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 CCT8P50990 548 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 YARSP54577 528 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 CYP27A1Q02318 531 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 UBXN1Q04323 297 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 ADCY1Q08828 1119 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 PAK1Q13153 545 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 NAB2Q15742 525 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 PDCD4Q53EL6 469 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 ZC2HC1CQ53FD0 456 aaPredicted RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 COBLL1Q53SF7 1204 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 RILPL1Q5EBL4 403 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF658Q5TYW1 1059 aaPredicted RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 TRIM68Q6AZZ1 485 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 TTI2Q6NXR4 508 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 DHRS4L2Q6PKH6 230 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 C4orf50Q6ZRC1 276 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 RGS9BPQ6ZS82 235 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF365Q70YC5 407 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 MARK2Q7KZI7 788 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 VN1R5Q7Z5H4 357 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 PODNQ7Z5L7 613 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 RSPH3Q86UC2 560 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 HOOK3Q86VS8 718 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 LONP2Q86WA8 852 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 ECHDC2Q86YB7 292 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 RAB11FIP4Q86YS3 637 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 NOSTRINQ8IVI9 506 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 SCUBE1Q8IWY4 988 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 IQCF2Q8IXL9 164 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 KBTBD2Q8IY47 623 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 CACTIN-AS1Q8N1I8 211 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 BBS5Q8N3I7 341 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 IL22RA1Q8N6P7 574 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 ATP11CQ8NB49 1132 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 IL17REQ8NFR9 667 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 DEPTORQ8TB45 409 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 DQX1Q8TE96 717 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 GAB3Q8WWW8 586 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 IFT81Q8WYA0 676 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 GRAMD1AQ96CP6 724 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 EDC3Q96F86 508 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 MS4A14Q96JA4 679 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 AIFM3Q96NN9 605 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 OLFM3Q96PB7 478 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 NUDCD1Q96RS6 583 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 KRT12Q99456 494 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 DUSP9Q99956 384 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 PLVAPQ9BX97 442 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 IFIH1Q9BYX4 1025 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 RBM38Q9H0Z9 239 aaKnown RBP5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 C17orf75Q9HAS0 396 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 NLRC4Q9NPP4 1024 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 AGPAT5Q9NUQ2 364 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 ETNK2Q9NVF9 386 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 QPCTLQ9NXS2 382 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 LNPEPQ9UIQ6 1025 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 NENFQ9UMX5 172 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 SIK3Q9Y2K2 1263 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 NUMBLQ9Y6R0 609 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms