RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CELF4Q9BZC1 486 aaKnown RBP6.12□□□□□ -1.43
SCAF11-214ENST00000550893 VPS33BQ9H267 617 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 BICC1Q9H694 974 aaKnown RBP6.12□□□□□ -1.43
SCAF11-214ENST00000550893 MYH16Q9H6N6 1097 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 TRIM39Q9HCM9 518 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 ARHGAP28Q9P2N2 729 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 ADAM29Q9UKF5 820 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 CASP8AP2Q9UKL3 1982 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 ATAD5Q96QE3 1844 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 RFX7Q2KHR2 1363 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 PRAMEF25A6NGN4 478 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 RASSF10A6NK89 507 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 H0Y858 1186 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 PLD2O14939 933 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 LAMTOR5O43504 91 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 B4GALT4O60513 344 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 ALDH1L1O75891 902 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 DDX58O95786 925 aaKnown RBP6.11□□□□□ -1.43
SCAF11-214ENST00000550893 CCT4P50991 539 aaKnown RBP6.11□□□□□ -1.43
SCAF11-214ENST00000550893 NFKB2Q00653 900 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 CHRNDQ07001 517 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 SURF1Q15526 300 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 CCDC144BQ3MJ40 725 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 CCDC152Q4G0S7 254 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 FSTL4Q6MZW2 842 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 LMBR1LQ6UX01 489 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 C15orf52Q6ZUT6 534 aaKnown RBP6.11□□□□□ -1.43
SCAF11-214ENST00000550893 PLEKHH3Q7Z736 793 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 NOSTRINQ8IVI9 506 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 KLHDC4Q8TBB5 520 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 UBXN4Q92575 508 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 MRFAP1L1Q96HT8 127 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 SSBP3Q9BWW4 388 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-214ENST00000550893 GLIS2Q9BZE0 524 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-214ENST00000550893 KANSL2Q9H9L4 492 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 RIPOR2Q9Y4F9 1068 aa6.11□□□□□ -1.43
SCAF11-214ENST00000550893 PTPRCP08575 1304 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 MYH7P12883 1935 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 ADM5C9JUS6 153 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 SCDO00767 359 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 TAF5LO75529 589 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 TRIM27P14373 513 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 AOAHP28039 575 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 PPP2CBP62714 309 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 PPP2CAP67775 309 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 ALDH1L2Q3SY69 923 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 LRRC24Q50LG9 513 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 TM4SF20Q53R12 229 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 ATG9AQ7Z3C6 839 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 LIMS2Q7Z4I7 341 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 IGSF22Q8N9C0 903 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 DPF2Q92785 391 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 AJUBAQ96IF1 538 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 CLUHP3Q96NS8 147 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 MEIS3Q99687 375 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 ADARB2Q9NS39 739 aaKnown RBP6.1□□□□□ -1.43
SCAF11-214ENST00000550893 PPP4R1LQ9P1A2 415 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 BTBD7Q9P203 1132 aa6.1□□□□□ -1.43
SCAF11-214ENST00000550893 SCAF8Q9UPN6 1271 aaKnown RBP6.1□□□□□ -1.43
SCAF11-214ENST00000550893 ZNF804BA4D1E1 1349 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 BCAR3O75815 825 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 ADRB1P08588 477 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 FGFR2P21802 821 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 PTGS1P23219 599 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 MC4RP32245 332 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 HERVK_113P62684 666 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 GLB1LQ6UWU2 654 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 ARHGEF18Q6ZSZ5 1173 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 USP50Q70EL3 339 aaPredicted RBP6.09□□□□□ -1.43
SCAF11-214ENST00000550893 GPR155Q7Z3F1 870 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 ANKRD18AQ8IVF6 992 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 CNTROBQ8N137 903 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 SUPT20HQ8NEM7 779 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 SH3TC2Q8TF17 1288 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 JDP2Q8WYK2 163 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 INCENPQ9NQS7 918 aa6.09□□□□□ -1.43
SCAF11-214ENST00000550893 CNOT7Q9UIV1 285 aaKnown RBP6.09□□□□□ -1.43
SCAF11-214ENST00000550893 ZBED9Q6R2W3 1325 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 ESYT3A0FGR9 886 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 MMEP08473 750 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 IL1R1P14778 569 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 CSF2RBP32927 897 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 MAGEA10P43363 369 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-214ENST00000550893 EPHB4P54760 987 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 NEXNQ0ZGT2 675 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 FNDC3BQ53EP0 1204 aaKnown RBP6.08□□□□□ -1.44
SCAF11-214ENST00000550893 TMEM177Q53S58 311 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 RALYLQ86SE5 291 aaKnown RBP6.08□□□□□ -1.44
SCAF11-214ENST00000550893 ZNF384Q8TF68 577 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 LOXL4Q96JB6 756 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 SAMD11Q96NU1 681 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 CDC5LQ99459 802 aaKnown RBP6.08□□□□□ -1.44
SCAF11-214ENST00000550893 PTPN18Q99952 460 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 KATNBL1Q9H079 304 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 PIF1Q9H611 641 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 CD209Q9NNX6 404 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 KCNH7Q9NS40 1196 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 UCKL1Q9NWZ5 548 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 SMPD4Q9NXE4 827 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms