RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 GLG1Q92896 1179 aa19.9■□□□□ 0.78
PRPF40B-208ENST00000548436 CAPS2Q9BXY5 557 aa19.9■□□□□ 0.78
PRPF40B-208ENST00000548436 PTPRJQ12913 1337 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 IGKV6D-21A0A0A0MT36 114 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 GOLGA6L10A0A0M3HER8 536 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 H0YGN5 161 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 ZC3H11AO75152 810 aaKnown RBP eCLIP19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 ABCD1P33897 745 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 ARL2P36404 184 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 IRAK1P51617 712 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 DR1Q01658 176 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 STRN3Q13033 797 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 LRRC45Q96CN5 670 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 PCYT2Q99447 389 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 TRIM31Q9BZY9 425 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 WNT8AQ9H1J5 351 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 KIAA1586Q9HCI6 787 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 FAM114A2Q9NRY5 505 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 CWC15Q9P013 229 aaKnown RBP19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 AGO2Q9UKV8 859 aaKnown RBP19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 NFS1Q9Y697 457 aa19.89■□□□□ 0.77
PRPF40B-208ENST00000548436 LRRIQ4A6NIV6 560 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 C4BPAP04003 597 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 EDN1P05305 212 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 UBA1P22314 1058 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 SKOR1P84550 965 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 CLUL1Q15846 466 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 PPP2R5EQ16537 467 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 CLEC16AQ2KHT3 1053 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 ZACNQ401N2 412 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 TDRD10Q5VZ19 366 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 ENOSF1Q7L5Y1 443 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 MORC4Q8TE76 937 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 C1orf112Q9NSG2 853 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 PAPPA2Q9BXP8 1791 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 GSTTP1A0A1W2PQM5 241 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 PYGMP11217 842 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 TNNI1P19237 187 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 NAMPTP43490 491 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 ZBTB41Q5SVQ8 909 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 CEP85LQ5SZL2 805 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 DUPD1Q68J44 220 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 PRELID2Q8N945 189 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 OR2W6PQ8NHA6 318 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 KCNN1Q92952 543 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 FNBP1Q96RU3 617 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 NIFKQ9BYG3 293 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 RAB17Q9H0T7 212 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 UVRAGQ9P2Y5 699 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 KCNG1Q9UIX4 513 aa19.88■□□□□ 0.77
PRPF40B-208ENST00000548436 GRIN2DO15399 1336 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 SOWAHBA6NEL2 793 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 K7ERI5 159 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 HLA-DRAP01903 254 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 CTNNA1P35221 906 aaKnown RBP19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 TTC19Q6DKK2 380 aaPredicted RBP19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 LRIG3Q6UXM1 1119 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 TMC3Q7Z5M5 1100 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 RIOX2Q8IUF8 465 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 DEPTORQ8TB45 409 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 C18orf8Q96DM3 657 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 ERP44Q9BS26 406 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 CNOT8Q9UFF9 292 aaKnown RBP19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 SPOPO43791 374 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 PHF2O75151 1096 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 FARP2O94887 1054 aaPredicted RBP19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 VNN1O95497 513 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 PIGRP01833 764 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 UNGP13051 313 aaPredicted RBP19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 CTNNA2P26232 953 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 SPOPLQ6IQ16 392 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 SLC7A3Q8WY07 619 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 ATP6V1G3Q96LB4 118 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 TARS2Q9BW92 718 aaKnown RBP19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 PCDHA3Q9Y5H8 950 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 LRRC37A2A6NM11 1700 aa19.87■□□□□ 0.77
PRPF40B-208ENST00000548436 SBF1O95248 1867 aa19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 TCRBV7S2A1N4TA0A589 114 aa19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 PTGIRP43119 386 aa19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 GNGT1P63211 74 aa19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 DHX34Q14147 1143 aaKnown RBP19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 SEL1L2Q5TEA6 688 aa19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 JAMLQ86YT9 394 aa19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 C1orf131Q8NDD1 294 aaKnown RBP19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 TMBIM4Q9HC24 238 aa19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 FBXO40Q9UH90 709 aa19.86■□□□□ 0.77
PRPF40B-208ENST00000548436 FAM187AA6NFU0 413 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 HSPA6P17066 643 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 EDNRBP24530 442 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 PIK3CAP42336 1068 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 ATP1A2P50993 1020 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 TARBP2Q15633 366 aaKnown RBP19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 WDR44Q5JSH3 913 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 UBLCP1Q8WVY7 318 aaPredicted RBP19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 R3HDMLQ9H3Y0 253 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 RBAKQ9NYW8 714 aaPredicted RBP19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 ANKFY1Q9P2R3 1169 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 KIAA0391O15091 583 aaKnown RBP19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 PPFIA4O75335 1185 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms