RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 USO1O60763 962 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 XYLBO75191 536 aa15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 CDKL5O76039 1030 aa15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 XBP1P17861 261 aa15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 VARS2Q5ST30 1063 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 LNX1Q8TBB1 728 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 PIGOQ8TEQ8 1089 aa15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 DDX23Q9BUQ8 820 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 CXCL16Q9H2A7 254 aa15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 GPRC5CQ9NQ84 441 aa15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 ANKEF1Q9NU02 776 aa15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 FBXO4Q9UKT5 387 aa15.51■□□□□ 0.07
SMARCA4-206ENST00000538456 PTGESO14684 152 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 SPTLC1O15269 473 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 HOXA9P31269 272 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 RARRES1P49788 294 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 PFKPQ01813 784 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 PRKCQQ04759 706 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 SCRN1Q12765 414 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 NR5A1Q13285 461 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 TMEM132AQ24JP5 1023 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 ZNF528Q3MIS6 628 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 PABPC1LQ4VXU2 614 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 AXDND1Q5T1B0 1012 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 TPRG1Q6ZUI0 275 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 NPAS3Q8IXF0 933 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 ATRIPQ8WXE1 791 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 HSD17B14Q9BPX1 270 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 LTB4R2Q9NPC1 389 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 PCDHA12Q9UN75 941 aa15.5■□□□□ 0.07
SMARCA4-206ENST00000538456 TRIP11Q15643 1979 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 ACACBO00763 2458 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 TTLL13PA6NNM8 815 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 RECQL4O94761 1208 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 LYPLA2O95372 231 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 THP07101 528 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 LIG1P18858 919 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 OR1D2P34982 312 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 CALCRLQ16602 461 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 TSSK4Q6SA08 328 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 PDZD7Q9H5P4 517 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 PDRG1Q9NUG6 133 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 PRMT7Q9NVM4 692 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 SNTG2Q9NY99 539 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 DNMT3BQ9UBC3 853 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 SMG5Q9UPR3 1016 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 USP20Q9Y2K6 914 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 PCDHGA2Q9Y5H1 932 aa15.49■□□□□ 0.07
SMARCA4-206ENST00000538456 STK36Q9NRP7 1315 aa15.48■□□□□ 0.07
SMARCA4-206ENST00000538456 TARSP26639 723 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-206ENST00000538456 ZBTB41Q5SVQ8 909 aa15.48■□□□□ 0.07
SMARCA4-206ENST00000538456 NOSTRINQ8IVI9 506 aa15.48■□□□□ 0.07
SMARCA4-206ENST00000538456 PRIMPOLQ96LW4 560 aa15.48■□□□□ 0.07
SMARCA4-206ENST00000538456 CNTNAP3BQ96NU0 1288 aa15.48■□□□□ 0.07
SMARCA4-206ENST00000538456 CNTNAP3Q9BZ76 1288 aa15.48■□□□□ 0.07
SMARCA4-206ENST00000538456 OSBPL6Q9BZF3 934 aa15.48■□□□□ 0.07
SMARCA4-206ENST00000538456 TTC12Q9H892 705 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-206ENST00000538456 N4BP3O15049 544 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 IGFBP6P24592 240 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 KRT2P35908 639 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 TXKP42681 527 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 ELAVL2Q12926 359 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 PRPF4BQ13523 1007 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 RAB33AQ14088 237 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 NAB2Q15742 525 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 SLC5A9Q2M3M2 681 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 GLRA4Q5JXX5 417 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 CDCA2Q69YH5 1023 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 PDXDC1Q6P996 788 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 ZBTB8OSQ8IWT0 167 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 SECISBP2LQ93073 1101 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 MCRS1Q96EZ8 462 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 HEBP1Q9NRV9 189 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 ZSCAN32Q9NX65 697 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 GDAQ9Y2T3 454 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 MRPS23Q9Y3D9 190 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 CDY1Q9Y6F8 540 aa15.47■□□□□ 0.07
SMARCA4-206ENST00000538456 NEMFO60524 1076 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 B3GAT3O94766 335 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 ATP2B1P20020 1258 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 MAGEA9P43362 315 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 RSPO2Q6UXX9 243 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 ZBTB44Q8NCP5 570 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 BSNDQ8WZ55 320 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 PLA2G2FQ9BZM2 168 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 TM6SF1Q9BZW5 370 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 EPC1Q9H2F5 836 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 FZD8Q9H461 694 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 BRMS1Q9HCU9 246 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 ORC3Q9UBD5 711 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 MTRRQ9UBK8 725 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 CDV3Q9UKY7 258 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 KCNH3Q9ULD8 1083 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 USP18Q9UMW8 372 aa15.46■□□□□ 0.07
SMARCA4-206ENST00000538456 F5P12259 2224 aa15.45■□□□□ 0.06
SMARCA4-206ENST00000538456 I3L4J1 428 aa15.45■□□□□ 0.06
SMARCA4-206ENST00000538456 WNT7AO00755 349 aa15.45■□□□□ 0.06
SMARCA4-206ENST00000538456 ECI2O75521 394 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms