RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 KMT5AQ9NQR1 393 aa19.7■□□□□ 0.74
SDC2-202ENST00000518385 GCNT4Q9P109 453 aa19.7■□□□□ 0.74
SDC2-202ENST00000518385 TBX20Q9UMR3 447 aa19.7■□□□□ 0.74
SDC2-202ENST00000518385 SYNGAP1Q96PV0 1343 aa19.69■□□□□ 0.74
SDC2-202ENST00000518385 LRRC37A2A6NM11 1700 aa19.69■□□□□ 0.74
SDC2-202ENST00000518385 ANKRD65E5RJM6 399 aa19.69■□□□□ 0.74
SDC2-202ENST00000518385 SLC9A1P19634 815 aa19.69■□□□□ 0.74
SDC2-202ENST00000518385 RDXP35241 583 aaKnown RBP19.69■□□□□ 0.74
SDC2-202ENST00000518385 RAPGEF1Q13905 1077 aa19.69■□□□□ 0.74
SDC2-202ENST00000518385 LACTB2Q53H82 288 aaPredicted RBP19.69■□□□□ 0.74
SDC2-202ENST00000518385 CYFIP1Q7L576 1253 aa19.69■□□□□ 0.74
SDC2-202ENST00000518385 EEPD1Q7L9B9 569 aa19.69■□□□□ 0.74
SDC2-202ENST00000518385 MS4A14Q96JA4 679 aa19.69■□□□□ 0.74
SDC2-202ENST00000518385 PLXNA1Q9UIW2 1896 aa19.69■□□□□ 0.74
SDC2-202ENST00000518385 ARID2Q68CP9 1835 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 SLC16A4O15374 487 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 FAM153BP0C7A2 387 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 CCDC172P0C7W6 258 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 FAM153CQ494X1 144 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 MORN1Q5T089 497 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 FAM160B1Q5W0V3 765 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 MAMDC4Q6UXC1 1216 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 ARMCX2Q7L311 632 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 SIX2Q9NPC8 291 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 NRBP2Q9NSY0 501 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 SLC5A4Q9NY91 659 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 HSPBP1Q9NZL4 362 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 SEPT9Q9UHD8 586 aaPredicted RBP19.68■□□□□ 0.74
SDC2-202ENST00000518385 FAM153AQ9UHL3 310 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 SLC12A6Q9UHW9 1150 aa19.68■□□□□ 0.74
SDC2-202ENST00000518385 TMEM150BA6NC51 233 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 CCDC169A6NNP5 214 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 H0YGN5 161 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 TRAPPC3O43617 180 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 AOC2O75106 756 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 OATP04181 439 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 FERP16591 822 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 MAP2K2P36507 400 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 HSD17B3P37058 310 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 ATP1A2P50993 1020 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 JAM2P57087 298 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 PPP2R2AP63151 447 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 HLTFQ14527 1009 aaKnown RBP eCLIP19.67■□□□□ 0.74
SDC2-202ENST00000518385 USP37Q86T82 979 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 HOOK3Q86VS8 718 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 EXOC8Q8IYI6 725 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 SH2D3CQ8N5H7 860 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 LRRC57Q8N9N7 239 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 CYFIP2Q96F07 1278 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 STK33Q9BYT3 514 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 RAB17Q9H0T7 212 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 GPRC5CQ9NQ84 441 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 NENFQ9UMX5 172 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 USP20Q9Y2K6 914 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 NFS1Q9Y697 457 aa19.67■□□□□ 0.74
SDC2-202ENST00000518385 MYH9P35579 1960 aaKnown RBP19.67■□□□□ 0.74
SDC2-202ENST00000518385 ZNF236Q9UL36 1845 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 A0A087X0T9 212 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 KIAA0391O15091 583 aaKnown RBP19.66■□□□□ 0.74
SDC2-202ENST00000518385 RASSF9O75901 435 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 FARP2O94887 1054 aaPredicted RBP19.66■□□□□ 0.74
SDC2-202ENST00000518385 FTCDO95954 541 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 FAM228BP0C875 321 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 UBA1P22314 1058 aaKnown RBP19.66■□□□□ 0.74
SDC2-202ENST00000518385 RFC5P40937 340 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 STAT1P42224 750 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 VAMP7P51809 220 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 GUCY1A3Q02108 690 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 BRDTQ58F21 947 aaPredicted RBP19.66■□□□□ 0.74
SDC2-202ENST00000518385 KCTD16Q68DU8 428 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 METTL7BQ6UX53 244 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 IRF2BP2Q7Z5L9 587 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 SEPT1Q8WYJ6 367 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 MAML3Q96JK9 1138 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 FAM167AQ96KS9 214 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 PSMB7Q99436 277 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.66■□□□□ 0.74
SDC2-202ENST00000518385 FAM129AQ9BZQ8 928 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 EHD2Q9NZN4 543 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 DENND3A2RUS2 1198 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 E7EVH7 732 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 KCNK3O14649 394 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 GARTP22102 1010 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 CTNNA1P35221 906 aaKnown RBP19.66■□□□□ 0.74
SDC2-202ENST00000518385 GUCY2FP51841 1108 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 MYL7Q01449 175 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 MAP2K5Q13163 448 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 LY6KQ17RY6 165 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 FBXW10Q5XX13 1052 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 CCDC62Q6P9F0 684 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 FBXO16Q8IX29 292 aaPredicted RBP19.66■□□□□ 0.74
SDC2-202ENST00000518385 NPLOC4Q8TAT6 608 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 USP6NLQ92738 828 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 IKZF4Q9H2S9 585 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 DHX33Q9H6R0 707 aaKnown RBP19.66■□□□□ 0.74
SDC2-202ENST00000518385 VTA1Q9NP79 307 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 XPNPEP1Q9NQW7 623 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 SMARCAL1Q9NZC9 954 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 MCM3APO60318 1980 aa19.66■□□□□ 0.74
SDC2-202ENST00000518385 RBM47A0AV96 593 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms