RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 DKK2Q9UBU2 259 aa4.44□□□□□ -1.7
PHC3-216ENST00000497171 G3BP2Q9UN86 482 aaKnown RBP4.44□□□□□ -1.7
PHC3-216ENST00000497171 WASHC2CQ9Y4E1 1318 aa4.44□□□□□ -1.7
PHC3-216ENST00000497171 OPHN1O60890 802 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 PROP1O75360 226 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 ULK1O75385 1050 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 MATN4O95460 622 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 ONECUT2O95948 504 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 BPIP17213 487 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 PTTG1IPP53801 180 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 CACNA2D1P54289 1103 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 RESTQ13127 1097 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 MYBPC3Q14896 1274 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 PLEKHG6Q3KR16 790 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 PDCD4Q53EL6 469 aaKnown RBP4.43□□□□□ -1.7
PHC3-216ENST00000497171 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 KIAA1614Q5VZ46 1190 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 KIAA1841Q6NSI8 718 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 XYLT1Q86Y38 959 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
PHC3-216ENST00000497171 KLHL42Q9P2K6 505 aa4.43□□□□□ -1.7
PHC3-216ENST00000497171 POLR2AP24928 1970 aaKnown RBP4.43□□□□□ -1.7
PHC3-216ENST00000497171 B5MCH6 92 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 CFBP00751 764 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 XPAP23025 273 aaPredicted RBP4.42□□□□□ -1.7
PHC3-216ENST00000497171 EXOSC10Q01780 885 aaKnown RBP4.42□□□□□ -1.7
PHC3-216ENST00000497171 MTMR1Q13613 665 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 ZNF169Q14929 603 aaPredicted RBP4.42□□□□□ -1.7
PHC3-216ENST00000497171 ODR4Q5SWX8 454 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 C1QL2Q7Z5L3 287 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 EFHBQ8N7U6 833 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 CNTD1Q8N815 330 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 ELF4Q99607 663 aaPredicted RBP4.42□□□□□ -1.7
PHC3-216ENST00000497171 ADAM2Q99965 735 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 CCDC8Q9H0W5 538 aaPredicted RBP4.42□□□□□ -1.7
PHC3-216ENST00000497171 METTL14Q9HCE5 456 aaKnown RBP4.42□□□□□ -1.7
PHC3-216ENST00000497171 TYW1Q9NV66 732 aaKnown RBP4.42□□□□□ -1.7
PHC3-216ENST00000497171 SLC17A6Q9P2U8 582 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 NOX1Q9Y5S8 564 aa4.42□□□□□ -1.7
PHC3-216ENST00000497171 PHLDB1Q86UU1 1377 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 ST20-MTHFSA0A0A6YYL1 179 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 DVL2O14641 736 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 NRP2O60462 931 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 PRPF6O94906 941 aaKnown RBP4.41□□□□□ -1.7
PHC3-216ENST00000497171 PTX3P26022 381 aaPredicted RBP4.41□□□□□ -1.7
PHC3-216ENST00000497171 RARRES1P49788 294 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 SIM1P81133 766 aaPredicted RBP4.41□□□□□ -1.7
PHC3-216ENST00000497171 MRPS35P82673 323 aaKnown RBP4.41□□□□□ -1.7
PHC3-216ENST00000497171 BROXQ5VW32 411 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 KANSL1Q7Z3B3 1105 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 NECAB2Q7Z6G3 386 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 PIK3C3Q8NEB9 887 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 JDP2Q8WYK2 163 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 SLC5A5Q92911 643 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 ZNF778Q96MU6 729 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 CDC5LQ99459 802 aaKnown RBP4.41□□□□□ -1.7
PHC3-216ENST00000497171 MYL10Q9BUA6 226 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 ALOXE3Q9BYJ1 711 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 TRHDEQ9UKU6 1024 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 MAP3K2Q9Y2U5 619 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 NOC2LQ9Y3T9 749 aaKnown RBP4.41□□□□□ -1.7
PHC3-216ENST00000497171 USP15Q9Y4E8 981 aaPredicted RBP4.41□□□□□ -1.7
PHC3-216ENST00000497171 SPO11Q9Y5K1 396 aa4.41□□□□□ -1.7
PHC3-216ENST00000497171 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.4□□□□□ -1.71
PHC3-216ENST00000497171 TGM5O43548 720 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 PRKD3O94806 890 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 LSP1P33241 339 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 APBA1Q02410 837 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 CREB3L3Q68CJ9 461 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 Q6ZNX1 250 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 PTF1AQ7RTS3 328 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 GPRIN1Q7Z2K8 1008 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 GRASPQ7Z6J2 395 aaPredicted RBP4.4□□□□□ -1.71
PHC3-216ENST00000497171 ZZZ3Q8IYH5 903 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 CDYL2Q8N8U2 506 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 TFAP2CQ92754 450 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 AHCYL2Q96HN2 611 aaKnown RBP4.4□□□□□ -1.71
PHC3-216ENST00000497171 Q96MF0 132 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 SOX7Q9BT81 388 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 TEX101Q9BY14 249 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 PUS7LQ9H0K6 701 aaKnown RBP4.4□□□□□ -1.71
PHC3-216ENST00000497171 MS4A5Q9H3V2 200 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 VTA1Q9NP79 307 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 TBCCD1Q9NVR7 557 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 ZNF70Q9UC06 446 aaPredicted RBP4.4□□□□□ -1.71
PHC3-216ENST00000497171 ATP11BQ9Y2G3 1177 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 PCDHB6Q9Y5E3 794 aa4.4□□□□□ -1.71
PHC3-216ENST00000497171 COL3A1P02461 1466 aaPredicted RBP4.39□□□□□ -1.71
PHC3-216ENST00000497171 LCHNA4D1U4 455 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 MARCH6O60337 910 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 ALDH1L1O75891 902 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 CLEC2LP0C7M8 214 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 CBSLP0DN79 551 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 CD40P25942 277 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 CBSP35520 551 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 NRG3P56975 720 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 SCAND1P57086 179 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 SESN3P58005 492 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 ABCB5Q2M3G0 1257 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 AKNAD1Q5T1N1 836 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms