RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CHD9Q3L8U1 2897 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 SMIM28A0A1B0GU29 152 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 CARNS1A5YM72 827 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 TGFB1I1O43294 461 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 CXCL8P10145 99 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 GARTP22102 1010 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 PPM1AP35813 382 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 OR1G1P47890 313 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 KCNB1Q14721 858 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 KYAT1Q16773 422 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 PTPROQ16827 1216 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 BMT2Q1RMZ1 405 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 NELFCDQ8IXH7 590 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 ERCC4Q92889 916 aaPredicted RBP14.77□□□□□ -0.05
COL1A1-208ENST00000494334 MRPL38Q96DV4 380 aaKnown RBP14.77□□□□□ -0.05
COL1A1-208ENST00000494334 IGSF21Q96ID5 467 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 ZMAT2Q96NC0 199 aaKnown RBP14.77□□□□□ -0.05
COL1A1-208ENST00000494334 PPP1R10Q96QC0 940 aaKnown RBP14.77□□□□□ -0.05
COL1A1-208ENST00000494334 LMAN2LQ9H0V9 348 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 PLEKHA5Q9HAU0 1116 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 CNTN3Q9P232 1028 aa14.77□□□□□ -0.05
COL1A1-208ENST00000494334 CHD7Q9P2D1 2997 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 UBE4BO95155 1302 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 TTC26A0AVF1 554 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 KINO60870 393 aaKnown RBP14.76□□□□□ -0.05
COL1A1-208ENST00000494334 KCNE1P15382 129 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 ACOT2P49753 483 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 KRT17Q04695 432 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 UBE3AQ05086 875 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 TUSC3Q13454 348 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 ENOX2Q16206 610 aaKnown RBP14.76□□□□□ -0.05
COL1A1-208ENST00000494334 KNOP1Q1ED39 458 aaKnown RBP14.76□□□□□ -0.05
COL1A1-208ENST00000494334 CRELD2Q6UXH1 353 aaPredicted RBP14.76□□□□□ -0.05
COL1A1-208ENST00000494334 ZSWIM2Q8NEG5 633 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 BCL7CQ8WUZ0 217 aaPredicted RBP14.76□□□□□ -0.05
COL1A1-208ENST00000494334 CCDC47Q96A33 483 aaKnown RBP14.76□□□□□ -0.05
COL1A1-208ENST00000494334 TMEM169Q96HH4 297 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 CBWD1Q9BRT8 395 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 PCIF1Q9H4Z3 704 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 RPF1Q9H9Y2 349 aaKnown RBP14.76□□□□□ -0.05
COL1A1-208ENST00000494334 CACNG4Q9UBN1 327 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 LZTS1Q9Y250 596 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 PRG3Q9Y2Y8 225 aaPredicted RBP14.76□□□□□ -0.05
COL1A1-208ENST00000494334 PCDHA5Q9Y5H7 936 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 RALGAPA2Q2PPJ7 1873 aa14.76□□□□□ -0.05
COL1A1-208ENST00000494334 CASTOR2A6NHX0 329 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 LACTBL1A8MY62 500 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 F8W810 466 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 CSPG5O95196 566 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 LDHAP00338 332 aaKnown RBP14.75□□□□□ -0.05
COL1A1-208ENST00000494334 ADRB2P07550 413 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 IRS1P35568 1242 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 ERVFC1P60507 584 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 ARMCX5Q6P1M9 558 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 SPATA20Q8TB22 786 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 RABGGTAQ92696 567 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 SAAL1Q96ER3 474 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 GBP4Q96PP9 640 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 PAAF1Q9BRP4 392 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 AGPAT3Q9NRZ7 376 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 LMBRD1Q9NUN5 540 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 MARCH5Q9NX47 278 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 PUF60Q9UHX1 559 aaKnown RBP14.75□□□□□ -0.05
COL1A1-208ENST00000494334 HOOK1Q9UJC3 728 aaKnown RBP14.75□□□□□ -0.05
COL1A1-208ENST00000494334 NLRC5Q86WI3 1866 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 KIAA1671Q9BY89 1806 aa14.75□□□□□ -0.05
COL1A1-208ENST00000494334 CLIC2O15247 247 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 SNRPFP62306 86 aaKnown RBP14.74□□□□□ -0.05
COL1A1-208ENST00000494334 POU5F1Q01860 360 aaKnown RBP14.74□□□□□ -0.05
COL1A1-208ENST00000494334 PPP2R3AQ06190 1150 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 SOX4Q06945 474 aaPredicted RBP14.74□□□□□ -0.05
COL1A1-208ENST00000494334 SPAG1Q07617 926 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 CCDC85BQ15834 202 aaPredicted RBP14.74□□□□□ -0.05
COL1A1-208ENST00000494334 DDX53Q86TM3 631 aaKnown RBP14.74□□□□□ -0.05
COL1A1-208ENST00000494334 MICALL1Q8N3F8 863 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 MAFAQ8NHW3 353 aaPredicted RBP14.74□□□□□ -0.05
COL1A1-208ENST00000494334 PPM1EQ8WY54 764 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 SMARCE1Q969G3 411 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 FAM212AQ96EL1 285 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 GSDMAQ96QA5 445 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 FAM213AQ9BRX8 229 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 COLEC11Q9BWP8 271 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 GOLGA2P5Q9HBQ8 144 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 TLR9Q9NR96 1032 aa14.74□□□□□ -0.05
COL1A1-208ENST00000494334 GOLGA8IPA6NC78 632 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 GOLGA8JA6NMD2 632 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 FSCN2O14926 492 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 KIAA0391O15091 583 aaKnown RBP14.73□□□□□ -0.05
COL1A1-208ENST00000494334 EXTL3O43909 919 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 SMC2O95347 1197 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 HSP90AA2PQ14568 343 aaPredicted RBP14.73□□□□□ -0.05
COL1A1-208ENST00000494334 ZBTB6Q15916 424 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 HS2ST1Q7LGA3 356 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 CD302Q8IX05 232 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 GPD1LQ8N335 351 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 MICAL1Q8TDZ2 1067 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 C18orf25Q96B23 403 aaPredicted RBP14.73□□□□□ -0.05
COL1A1-208ENST00000494334 KIF12Q96FN5 646 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 VN1R3Q9BXE9 311 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 KCTD10Q9H3F6 313 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms