RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 GIT1Q9Y2X7 761 aa13.52□□□□□ -0.25
SNX17-208ENST00000493711 IPPQ9Y573 584 aa13.52□□□□□ -0.25
SNX17-208ENST00000493711 FAM189A1O60320 539 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 MGEA5O60502 916 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 SYN1P17600 705 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 KCNJ6P48051 423 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 AP3M2P53677 418 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 EMP3P54852 163 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 MARSP56192 900 aaKnown RBP13.51□□□□□ -0.25
SNX17-208ENST00000493711 MCCD1P59942 119 aaPredicted RBP13.51□□□□□ -0.25
SNX17-208ENST00000493711 IQCB1Q15051 598 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 CCDC40Q4G0X9 1142 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 RTN4RL1Q86UN2 441 aaPredicted RBP13.51□□□□□ -0.25
SNX17-208ENST00000493711 CDR2LQ86X02 465 aaPredicted RBP13.51□□□□□ -0.25
SNX17-208ENST00000493711 NT5DC4Q86YG4 428 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 NPAS4Q8IUM7 802 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 BRSK2Q8IWQ3 736 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 SMG8Q8ND04 991 aaKnown RBP13.51□□□□□ -0.25
SNX17-208ENST00000493711 TMC2Q8TDI7 906 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 SAAL1Q96ER3 474 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 MFSD14AQ96MC6 490 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 MED15Q96RN5 788 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 HAPLN2Q9GZV7 340 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 PRO3102Q9H379 93 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 RBAKQ9NYW8 714 aaPredicted RBP13.51□□□□□ -0.25
SNX17-208ENST00000493711 LRFN2Q9ULH4 789 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 DERAQ9Y315 318 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 PCDHB7Q9Y5E2 793 aa13.51□□□□□ -0.25
SNX17-208ENST00000493711 AKAP3O75969 853 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 ADRB2P07550 413 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 CDK11BP21127 795 aaKnown RBP13.5□□□□□ -0.25
SNX17-208ENST00000493711 ACOT2P49753 483 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 CYP24A1Q07973 514 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 PSMD6Q15008 389 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 CDKAL1Q5VV42 579 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 GLB1LQ6UWU2 654 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 ZNF598Q86UK7 904 aaKnown RBP13.5□□□□□ -0.25
SNX17-208ENST00000493711 DHX40Q8IX18 779 aaKnown RBP13.5□□□□□ -0.25
SNX17-208ENST00000493711 HERVK_113Q902F9 699 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 VWCEQ96DN2 955 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 FNBP1Q96RU3 617 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 NXF3Q9H4D5 531 aaKnown RBP13.5□□□□□ -0.25
SNX17-208ENST00000493711 FANCLQ9NW38 375 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 KANSL3Q9P2N6 904 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 PARP2Q9UGN5 583 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 CUL9Q8IWT3 2517 aa13.5□□□□□ -0.25
SNX17-208ENST00000493711 GOLGA8IPA6NC78 632 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 GOLGA8JA6NMD2 632 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 INPPL1O15357 1258 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
SNX17-208ENST00000493711 GTF2H1P32780 548 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 NCAPHQ15003 741 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 TMEM240Q5SV17 173 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 CRELD2Q6UXH1 353 aaPredicted RBP13.49□□□□□ -0.25
SNX17-208ENST00000493711 ZNF365Q70YC5 407 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 LUZP1Q86V48 1076 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 CBWD2Q8IUF1 395 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 PHOSPHO2Q8TCD6 241 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 CACTINQ8WUQ7 758 aaKnown RBP13.49□□□□□ -0.25
SNX17-208ENST00000493711 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 SNX27Q96L92 541 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 CNOT6LQ96LI5 555 aaKnown RBP13.49□□□□□ -0.25
SNX17-208ENST00000493711 RSAD1Q9HA92 442 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 RTN4Q9NQC3 1192 aaKnown RBP13.49□□□□□ -0.25
SNX17-208ENST00000493711 SLC38A7Q9NVC3 462 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 SNTG2Q9NY99 539 aa13.49□□□□□ -0.25
SNX17-208ENST00000493711 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.48□□□□□ -0.25
SNX17-208ENST00000493711 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 CARNS1A5YM72 827 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 KCNJ18B7U540 433 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 RECQL4O94761 1208 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 ACRP10323 421 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 KCNE1P15382 129 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 ZNF18P17022 549 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 MTIF2P46199 727 aaKnown RBP13.48□□□□□ -0.25
SNX17-208ENST00000493711 CASP4P49662 377 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 VAMP7P51809 220 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 OSTNP61366 133 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 WDR5P61964 334 aaKnown RBP13.48□□□□□ -0.25
SNX17-208ENST00000493711 BFSP1Q12934 665 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 KCNJ12Q14500 433 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 ENOX2Q16206 610 aaKnown RBP13.48□□□□□ -0.25
SNX17-208ENST00000493711 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 XKR4Q5GH76 650 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 TCP11X2Q5H9J9 407 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 ALKAL1Q6UXT8 129 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 C16orf59Q7L2K0 433 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 ABI1Q8IZP0 508 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 RDH13Q8NBN7 331 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 RNF169Q8NCN4 708 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 URGCPQ8TCY9 931 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 RPS6KC1Q96S38 1066 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 MRPL9Q9BYD2 267 aaKnown RBP13.48□□□□□ -0.25
SNX17-208ENST00000493711 SAMSN1Q9NSI8 373 aaKnown RBP13.48□□□□□ -0.25
SNX17-208ENST00000493711 CNTN3Q9P232 1028 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 C2CD2Q9Y426 696 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNX17-208ENST00000493711 UNC80Q8N2C7 3258 aa13.48□□□□□ -0.25
SNX17-208ENST00000493711 ZBBXA8MT70 800 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 LACTBL1A8MY62 500 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms