RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 FRYLO94915 3013 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 MYH7BA7E2Y1 1941 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 TSPY2A6NKD2 308 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 TMPRSS2O15393 492 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 LGALS2P05162 132 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 NFICP08651 508 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 STAG3L1P0CL83 205 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 LIG1P18858 919 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 CD52P31358 61 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 SP2Q02086 613 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 ATAT1Q5SQI0 421 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 ARHGEF16Q5VV41 709 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 ZSCAN25Q6NSZ9 544 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 XRRA1Q6P2D8 792 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 RUFY4Q6ZNE9 571 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 ZAR1Q86SH2 424 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 PDZD3Q86UT5 571 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 CLASRPQ8N2M8 674 aaKnown RBP6.2□□□□□ -1.42
PTPN4-210ENST00000485247 TMEM57Q8N5G2 664 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 C3orf58Q8NDZ4 430 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 SYTL5Q8TDW5 730 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-210ENST00000485247 SECISBP2LQ93073 1101 aaKnown RBP6.2□□□□□ -1.42
PTPN4-210ENST00000485247 ACSF2Q96CM8 615 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-210ENST00000485247 ASB16Q96NS5 453 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 PSMG3-AS1Q96PY0 264 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 IWS1Q96ST2 819 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 TRAIPQ9BWF2 469 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 AGO3Q9H9G7 860 aaKnown RBP6.2□□□□□ -1.42
PTPN4-210ENST00000485247 MLXIPQ9HAP2 919 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 ZFYVE1Q9HBF4 777 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 RAD18Q9NS91 495 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 PNMA2Q9UL42 364 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 SIT1Q9Y3P8 196 aa6.2□□□□□ -1.42
PTPN4-210ENST00000485247 ANKRD11Q6UB99 2663 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-210ENST00000485247 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 TBKBP1A7MCY6 615 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 IPO8O15397 1037 aaKnown RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 SLC3A2P08195 630 aaKnown RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 GSTP1P09211 210 aaKnown RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 CT47B1P0C2W7 299 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 MYCLP12524 364 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 SCG2P13521 617 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 TGM1P22735 817 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 CA8P35219 290 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 GRIK1P39086 918 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 MAPK8P45983 427 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 ADAM17P78536 824 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 MGAT3Q09327 533 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 FBXO47Q5MNV8 452 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 FAM102BQ5T8I3 360 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 KIAA1841Q6NSI8 718 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 SEZ6L2Q6UXD5 910 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 TSHZ1Q6ZSZ6 1077 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 MAML2Q8IZL2 1156 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 COLGALT1Q8NBJ5 622 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 RGS22Q8NE09 1264 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 FEZF2Q8TBJ5 459 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 LMBR1Q8WVP7 490 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 DNAJB3Q8WWF6 145 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 ATRIPQ8WXE1 791 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 MRPS27Q92552 414 aaKnown RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 OSBP2Q969R2 916 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 TBC1D32Q96NH3 1257 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 YIPF2Q9BWQ6 316 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 BCAS3Q9H6U6 928 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 PARD6AQ9NPB6 346 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 NGRNQ9NPE2 291 aaKnown RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 DLGAP2Q9P1A6 1054 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 WNT16Q9UBV4 365 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 GPN3Q9UHW5 284 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 PUF60Q9UHX1 559 aaKnown RBP6.19□□□□□ -1.42
PTPN4-210ENST00000485247 WDR19Q8NEZ3 1342 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 KIAA1217Q5T5P2 1943 aa6.19□□□□□ -1.42
PTPN4-210ENST00000485247 FANCMQ8IYD8 2048 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.18□□□□□ -1.42
PTPN4-210ENST00000485247 FAM170BA6NMN3 283 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 NOP56O00567 594 aaKnown RBP6.18□□□□□ -1.42
PTPN4-210ENST00000485247 SLC30A4O14863 429 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 GPAA1O43292 621 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 CLASP2O75122 1294 aaKnown RBP6.18□□□□□ -1.42
PTPN4-210ENST00000485247 PROS1P07225 676 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 GLULP15104 373 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 ATP5JP18859 108 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 UBA1P22314 1058 aaKnown RBP6.18□□□□□ -1.42
PTPN4-210ENST00000485247 PMLP29590 882 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 ASPAP45381 313 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 MSMPQ1L6U9 139 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 TAF2Q6P1X5 1199 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 TMC5Q6UXY8 1006 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 OTOP3Q7RTS5 596 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 RSPH3Q86UC2 560 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 IFNL3Q8IZI9 196 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 RSAD2Q8WXG1 361 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 FTHL17Q9BXU8 183 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 OSBPL1AQ9BXW6 950 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 FOXQ1Q9C009 403 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 CPVLQ9H3G5 476 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 PXMP2Q9NR77 195 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 C1GALT1Q9NS00 363 aa6.18□□□□□ -1.42
PTPN4-210ENST00000485247 TYW1Q9NV66 732 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms