RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	SGMS1	Q86VZ5	419 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	DRC7	Q8IY82	874 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	TCEAL8	Q8IYN2	117 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	GRAMD1C	Q8IYS0	662 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	SLC35B2	Q8TB61	432 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	HPS3	Q969F9	1004 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	CYFIP2	Q96F07	1278 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	AIFM3	Q96NN9	605 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	MPHOSPH9	Q99550	1183 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	MAP3K14	Q99558	947 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	LSM14B	Q9BX40	385 aa	Known RBP	5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	KCNH6	Q9H252	994 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	SLC12A5	Q9H2X9	1139 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	NMRK2	Q9NPI5	230 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	SRRD	Q9UH36	339 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	HDAC5	Q9UQL6	1122 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	CFAP20	Q9Y6A4	193 aa	Known RBP	5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	ATRNL1	Q5VV63	1379 aa		5.51	□□□□□ -1.53
RBM39-231	ENST00000477334	CAPN14	A8MX76	684 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	MFAP3L	O75121	409 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	C6	P13671	934 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	HSPA6	P17066	643 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	ACO1	P21399	889 aa	Known RBP	5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	TACR2	P21452	398 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	DSC2	Q02487	901 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	SP140	Q13342	867 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	MTM1	Q13496	603 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	GTF2H3	Q13889	308 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	PGS1	Q32NB8	556 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	ATAT1	Q5SQI0	421 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	TTC7B	Q86TV6	843 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	FAM83A	Q86UY5	434 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	PALM2	Q8IXS6	379 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	MAGEB6	Q8N7X4	407 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	SLC16A11	Q8NCK7	471 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	ST8SIA2	Q92186	375 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	MVB12A	Q96EY5	273 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	CLPTM1L	Q96KA5	538 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	MYOC	Q99972	504 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	MOCS1	Q9NZB8	636 aa		5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	HECA	Q9UBI9	543 aa	Predicted RBP	5.5	□□□□□ -1.53
RBM39-231	ENST00000477334	LRRC14B	A6NHZ5	514 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	CXorf49	A8MYA2	514 aa	Predicted RBP	5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	MUSK	O15146	869 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	SGTA	O43765	313 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	IPO13	O94829	963 aa	Known RBP	5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	FSHB	P01225	129 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	RPLP2	P05387	115 aa	Known RBP	5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	MYB	P10242	640 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	HK1	P19367	917 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	RAP2B	P61225	183 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	ATP8B2	P98198	1209 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	PTH1R	Q03431	593 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	HS1BP3	Q53T59	392 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	NXN	Q6DKJ4	435 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	CRIP3	Q6Q6R5	217 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	B3GNT9	Q6UX72	402 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334		Q6ZSN1	163 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	CAMKK1	Q8N5S9	505 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	SLC35G2	Q8TBE7	412 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	NSUN6	Q8TEA1	469 aa	Known RBP	5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	DIS3L	Q8TF46	1054 aa	Known RBP	5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	CASKIN2	Q8WXE0	1202 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	MIEF2	Q96C03	454 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	PGBD4	Q96DM1	585 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	VRK1	Q99986	396 aa	Predicted RBP	5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	MRI1	Q9BV20	369 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	SPON1	Q9HCB6	807 aa		5.49	□□□□□ -1.53
RBM39-231	ENST00000477334	TBKBP1	A7MCY6	615 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334		B5MCH6	92 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	FTL	P02792	175 aa	Predicted RBP	5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	ATF3	P18847	181 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	ATP5J	P18859	108 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	HIBADH	P31937	336 aa	Known RBP	5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	ZNF280A	P59817	542 aa	Predicted RBP	5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.48	□□□□□ -1.53	2e-21	■□□□□ 10.6
RBM39-231	ENST00000477334	MINDY4	Q4G0A6	757 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	KHDC1	Q4VXA5	237 aa	Known RBP	5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	MAMDC4	Q6UXC1	1216 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	GADL1	Q6ZQY3	521 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	DOK3	Q7L591	496 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	GSPT2	Q8IYD1	628 aa	Known RBP	5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	ANKRD35	Q8N283	1001 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	RNF169	Q8NCN4	708 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	MDGA1	Q8NFP4	955 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	TTC8	Q8TAM2	541 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	IFI44	Q8TCB0	444 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	FAM89A	Q96GI7	184 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	MRGPRX4	Q96LA9	322 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	TAAR9	Q96RI9	348 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	DMRTA2	Q96SC8	542 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	ADO	Q96SZ5	270 aa		5.48	□□□□□ -1.53
RBM39-231	ENST00000477334	ACO2	Q99798	780 aa	Known RBP	5.48	□□□□□ -1.53

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