RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 BROXQ5VW32 411 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 LYSMD4Q5XG99 296 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 FCHSD1Q86WN1 690 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 MFSD6LQ8IWD5 586 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 SRRM1Q8IYB3 904 aaKnown RBP7.54□□□□□ -1.2
HDAC3-206ENST00000471968 DAGLBQ8NCG7 672 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 URGCPQ8TCY9 931 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 TSC1Q92574 1164 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 SMARCD2Q92925 531 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 TMEM176AQ96HP8 235 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 NAF1Q96HR8 494 aaKnown RBP7.54□□□□□ -1.2
HDAC3-206ENST00000471968 ZSWIM3Q96MP5 696 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 PCYT2Q99447 389 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 LGMNQ99538 433 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 SENP7Q9BQF6 1050 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 TMEM47Q9BQJ4 181 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 AZI2Q9H6S1 392 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 CAPN10Q9HC96 672 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 CHST7Q9NS84 486 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 DACT1Q9NYF0 836 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 PILRBQ9UKJ0 227 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 CIZ1Q9ULV3 898 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-206ENST00000471968 ZMYM6O95789 1325 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 PDCD11Q14690 1871 aaKnown RBP7.53□□□□□ -1.2
HDAC3-206ENST00000471968 NBASA2RRP1 2371 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 WDR27A2RRH5 827 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 HEPACAM2A8MVW5 462 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 F8W810 466 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 CHADO15335 359 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 GJB3O75712 270 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 EFEMP2O95967 443 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 GNAI2P04899 355 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 SLC3A2P08195 630 aaKnown RBP7.53□□□□□ -1.2
HDAC3-206ENST00000471968 SYPP08247 313 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 POU2F2P09086 479 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 TOP1P11387 765 aaKnown RBP7.53□□□□□ -1.2
HDAC3-206ENST00000471968 DPP6P42658 865 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 NOVP48745 357 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 AFF1P51825 1210 aaKnown RBP7.53□□□□□ -1.2
HDAC3-206ENST00000471968 CREMQ03060 361 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 DMC1Q14565 340 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 QRICH1Q2TAL8 776 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 AXDND1Q5T1B0 1012 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-206ENST00000471968 KIAA1614Q5VZ46 1190 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 PRSS55Q6UWB4 352 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-206ENST00000471968 ZC3H18Q86VM9 953 aaKnown RBP7.53□□□□□ -1.2
HDAC3-206ENST00000471968 GIMAP8Q8ND71 665 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-206ENST00000471968 CEP76Q8TAP6 659 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 TCEAL4Q96EI5 215 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 ZNF668Q96K58 619 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-206ENST00000471968 TMEM209Q96SK2 561 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 PAG1Q9NWQ8 432 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 AKAP9Q99996 3911 aa7.53□□□□□ -1.2
HDAC3-206ENST00000471968 RANBP6O60518 1105 aaKnown RBP7.52□□□□□ -1.21
HDAC3-206ENST00000471968 ATP9AO75110 1047 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 STAM2O75886 525 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 POMCP01189 267 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 EIF4BP23588 611 aaKnown RBP7.52□□□□□ -1.21
HDAC3-206ENST00000471968 UCNP55089 124 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 GHRHRQ02643 423 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 GRSF1Q12849 480 aaKnown RBP eCLIP7.52□□□□□ -1.21
HDAC3-206ENST00000471968 NBR1Q14596 966 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 USP41Q3LFD5 358 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 PEAR1Q5VY43 1037 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-206ENST00000471968 ANO7Q6IWH7 933 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 FSTL4Q6MZW2 842 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 DHRS13Q6UX07 377 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 SYT13Q7L8C5 426 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 ADGRF4Q8IZF3 695 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 METTL13Q8N6R0 699 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 TSTD1Q8NFU3 115 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 RPLP0P6Q8NHW5 317 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 RLN3Q8WXF3 142 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 ZFYVE19Q96K21 471 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 PNMA5Q96PV4 448 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 FNBP1Q96RU3 617 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 LPIN3Q9BQK8 851 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 SNTG2Q9NY99 539 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 PKD2L1Q9P0L9 805 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 HIVEP1P15822 2718 aa7.52□□□□□ -1.21
HDAC3-206ENST00000471968 VWA8A3KMH1 1905 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 MYH7P12883 1935 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 DHX16O60231 1041 aaKnown RBP7.51□□□□□ -1.21
HDAC3-206ENST00000471968 BCAR3O75815 825 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 EGFP01133 1207 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 KCNA2P16389 499 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 HOXD12P35452 270 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 NLRP11P59045 1033 aaKnown RBP7.51□□□□□ -1.21
HDAC3-206ENST00000471968 PPARAQ07869 468 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 POLA2Q14181 598 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 PRSS36Q5K4E3 855 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 ZNF787Q6DD87 383 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 TWF2Q6IBS0 349 aaKnown RBP7.51□□□□□ -1.21
HDAC3-206ENST00000471968 TTC30AQ86WT1 665 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 ERICH1Q86X53 443 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 TICAM1Q8IUC6 712 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 FRMD1Q8N878 549 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 EXD3Q8N9H8 876 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 ZSCAN18Q8TBC5 510 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-206ENST00000471968 RSPRY1Q96DX4 576 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms