RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 AKAP5P24588 427 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 MCCD1P59942 119 aaPredicted RBP12.86□□□□□ -0.35
RNF13-208ENST00000467996 POU5F1Q01860 360 aaKnown RBP12.86□□□□□ -0.35
RNF13-208ENST00000467996 PPP2R3AQ06190 1150 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 SLC10A6Q3KNW5 377 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 VWA3BQ502W6 1294 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 C1orf220Q5T0J3 134 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 FAM43BQ6ZT52 329 aaPredicted RBP12.86□□□□□ -0.35
RNF13-208ENST00000467996 ECHDC2Q86YB7 292 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 CCDC127Q96BQ5 260 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 SNX27Q96L92 541 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 CGRRF1Q99675 332 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
RNF13-208ENST00000467996 PDE11AQ9HCR9 933 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 C1orf112Q9NSG2 853 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 INTS13Q9NVM9 706 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 IFNKQ9P0W0 207 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 FNDC1Q4ZHG4 1894 aaPredicted RBP12.86□□□□□ -0.35
RNF13-208ENST00000467996 PTPRJQ12913 1337 aa12.86□□□□□ -0.35
RNF13-208ENST00000467996 A0A1B0GTH6 734 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 TTC26A0AVF1 554 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 MEIS3P2A8K0S8 358 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 LGALS16A8MUM7 142 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
RNF13-208ENST00000467996 ZNF623O75123 536 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 IL18RAPO95256 599 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 AFPP02771 609 aaKnown RBP12.85□□□□□ -0.35
RNF13-208ENST00000467996 PFKMP08237 780 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 DLATP10515 647 aaKnown RBP12.85□□□□□ -0.35
RNF13-208ENST00000467996 ITGA4P13612 1032 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 YARSP54577 528 aaKnown RBP12.85□□□□□ -0.35
RNF13-208ENST00000467996 UBASH3AP57075 661 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 KCNH2Q12809 1159 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 SURF1Q15526 300 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 SLC24A5Q71RS6 500 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 MRPL10Q7Z7H8 261 aaKnown RBP12.85□□□□□ -0.35
RNF13-208ENST00000467996 USP37Q86T82 979 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 ZNF598Q86UK7 904 aaKnown RBP12.85□□□□□ -0.35
RNF13-208ENST00000467996 HACE1Q8IYU2 909 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 BADQ92934 168 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 LPPQ93052 612 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 NAP1L5Q96NT1 182 aaPredicted RBP12.85□□□□□ -0.35
RNF13-208ENST00000467996 FNBP1Q96RU3 617 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 XPO4Q9C0E2 1151 aaKnown RBP12.85□□□□□ -0.35
RNF13-208ENST00000467996 NDST4Q9H3R1 872 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 MMRN2Q9H8L6 949 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 TOPORSQ9NS56 1045 aaPredicted RBP12.85□□□□□ -0.35
RNF13-208ENST00000467996 PARP2Q9UGN5 583 aa12.85□□□□□ -0.35
RNF13-208ENST00000467996 TTC3P53804 2025 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.84□□□□□ -0.35
RNF13-208ENST00000467996 LACTBL1A8MY62 500 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 PES1O00541 588 aaKnown RBP12.84□□□□□ -0.35
RNF13-208ENST00000467996 ENPP3O14638 875 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 CBFA2T2O43439 604 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 NFICP08651 508 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 SYN1P17600 705 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 IBSPP21815 317 aaPredicted RBP12.84□□□□□ -0.35
RNF13-208ENST00000467996 CLDN10P78369 228 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 PPP3CAQ08209 521 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 FILIP1LQ4L180 1135 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 CBWD6Q4V339 395 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 CBWD3Q5JTY5 395 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 CBWD5Q5RIA9 395 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 LMBRD2Q68DH5 695 aaPredicted RBP12.84□□□□□ -0.35
RNF13-208ENST00000467996 JADE1Q6IE81 842 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 WDR49Q8IV35 697 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 CD302Q8IX05 232 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 EFCAB13Q8IY85 973 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 RNF169Q8NCN4 708 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 FAM84AQ96KN4 292 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
RNF13-208ENST00000467996 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 CXCL16Q9H2A7 254 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 ASB7Q9H672 318 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 PLEKHA5Q9HAU0 1116 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 IL23AQ9NPF7 189 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 RTN4Q9NQC3 1192 aaKnown RBP12.84□□□□□ -0.35
RNF13-208ENST00000467996 KLK14Q9P0G3 267 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
RNF13-208ENST00000467996 COL4A6Q14031 1691 aa12.83□□□□□ -0.35
RNF13-208ENST00000467996 TEX33O43247 280 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 STX10O60499 249 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 ACRP10323 421 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 TNNI1P19237 187 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 MLH1P40692 756 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 GCLMP48507 274 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 FMO5P49326 533 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 MXI1P50539 228 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 ZNF75DP51815 510 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 FAM189BP81408 668 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 MYL7Q01449 175 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 FPGSQ05932 587 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 PPIGQ13427 754 aaKnown RBP eCLIP12.83□□□□□ -0.36
RNF13-208ENST00000467996 IKBKEQ14164 716 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 NR1I3Q14994 352 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 XKR4Q5GH76 650 aa12.83□□□□□ -0.36
RNF13-208ENST00000467996 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms