RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 RPS6KC1Q96S38 1066 aa20.93■□□□□ 0.94
CNEP1R1-203ENST00000458059 TACO1Q9BSH4 297 aaKnown RBP20.93■□□□□ 0.94
CNEP1R1-203ENST00000458059 TMEM206Q9H813 350 aa20.93■□□□□ 0.94
CNEP1R1-203ENST00000458059 PARP2Q9UGN5 583 aa20.93■□□□□ 0.94
CNEP1R1-203ENST00000458059 TP73O15350 636 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 PLS3P13797 630 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 BRAFP15056 766 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 NEDD9Q14511 834 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 FAM182AQ5T1J6 154 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 TAOK1Q7L7X3 1001 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 CENPTQ96BT3 561 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 STRA6Q9BX79 667 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 ATP9AO75110 1047 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 PIAS1O75925 651 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 MFAP3P55082 362 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 MYO1EQ12965 1108 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 KAZNQ674X7 775 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 CC2D2BQ6DHV5 1058 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 SPOPLQ6IQ16 392 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 SLC9A9Q8IVB4 645 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 TAB3Q8N5C8 712 aaPredicted RBP20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 POMGNT1Q8WZA1 660 aa20.92■□□□□ 0.94
CNEP1R1-203ENST00000458059 P4HBP07237 508 aaKnown RBP20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 CFHP08603 1231 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 EZRP15311 586 aaKnown RBP20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 MASTLQ96GX5 879 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 ECT2Q9H8V3 914 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 ASAP2O43150 1006 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 SNX3O60493 162 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 SPAG7O75391 227 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 HSPA6P17066 643 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 CD58P19256 250 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 SCP2P22307 547 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 VSTM1Q6UX27 236 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 ATP8B3O60423 1300 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 UBE4BO95155 1302 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 TESPA1A2RU30 521 aaPredicted RBP20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 DENND3A2RUS2 1198 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 PI4K2BG5E9Z4 385 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 NT5C1BQ96P26 610 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 RAVER2Q9HCJ3 691 aaKnown RBP20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 HOMER3Q9NSC5 361 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 TMX2Q9Y320 296 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 TELO2Q9Y4R8 837 aa20.91■□□□□ 0.94
CNEP1R1-203ENST00000458059 IGF2BP3O00425 579 aaKnown RBP eCLIP20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 DNAJC8O75937 253 aaPredicted RBP20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 RALAP11233 206 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 CNGA1P29973 690 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 QARSP47897 775 aaKnown RBP20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 CHURC1Q8WUH1 139 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 ACSF2Q96CM8 615 aaPredicted RBP20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 NSRP1Q9H0G5 558 aaKnown RBP20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 CNOT7Q9UIV1 285 aaKnown RBP20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 MCM8Q9UJA3 840 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 UBR3Q6ZT12 1888 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 LTBP1Q14766 1721 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 GBP2P32456 591 aaPredicted RBP20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 CDR2Q01850 454 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 MTMR1Q13613 665 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 HELQQ8TDG4 1101 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 PSPC1Q8WXF1 523 aaKnown RBP20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 SHC3Q92529 594 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 EHMT1Q9H9B1 1298 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 ANAPC5Q9UJX4 755 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 GTF3C4Q9UKN8 822 aa20.9■□□□□ 0.94
CNEP1R1-203ENST00000458059 ELF1P32519 619 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 STX2P32856 288 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 TMED2Q15363 201 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 KRT39Q6A163 491 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 GSTA5Q7RTV2 222 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 HAUS1Q96CS2 278 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 BICD1Q96G01 975 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 RMDN2Q96LZ7 410 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 C11orf70Q9BRQ4 267 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 FAM213AQ9BRX8 229 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 TMOD2Q9NZR1 351 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 SERPINA10Q9UK55 444 aa20.89■□□□□ 0.94
CNEP1R1-203ENST00000458059 MGRN1O60291 552 aa20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 ATF2P15336 505 aa20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 SV2AQ7L0J3 742 aa20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 SPOCK2Q92563 424 aa20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 RANBP17Q9H2T7 1088 aaKnown RBP20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 SLC12A4Q9UP95 1085 aa20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 USP15Q9Y4E8 981 aaPredicted RBP20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 LY75O60449 1722 aa20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 C10orf71Q711Q0 1435 aa20.89■□□□□ 0.93
CNEP1R1-203ENST00000458059 DHX15O43143 795 aaKnown RBP20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 CYP1A2P05177 515 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 RFX1P22670 979 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 PDE6BP35913 854 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 ALDH5A1P51649 535 aaPredicted RBP20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 MRPS9P82933 396 aaKnown RBP20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 TKFCQ3LXA3 575 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 ATP13A4Q4VNC1 1196 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 FMNL3Q8IVF7 1028 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 PARD3BQ8TEW8 1205 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 BSNDQ8WZ55 320 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 TGS1Q96RS0 853 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms