RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 TBATAQ96M53 351 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 FAM129BQ96TA1 746 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 ELAC2Q9BQ52 826 aaKnown RBP5.31□□□□□ -1.56
EPHA3-202ENST00000452448 SIKE1Q9BRV8 207 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 CAAP1Q9H8G2 361 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 LIN28AQ9H9Z2 209 aaKnown RBP5.31□□□□□ -1.56
EPHA3-202ENST00000452448 PIDD1Q9HB75 910 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 LY9Q9HBG7 655 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 PAG1Q9NWQ8 432 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 TRPM5Q9NZQ8 1165 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 NFKBIL1Q9UBC1 381 aaPredicted RBP5.31□□□□□ -1.56
EPHA3-202ENST00000452448 PCDHB3Q9Y5E6 796 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 FADS3Q9Y5Q0 445 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.31□□□□□ -1.56
EPHA3-202ENST00000452448 MAP3K19Q56UN5 1328 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 USP31Q70CQ4 1352 aa5.31□□□□□ -1.56
EPHA3-202ENST00000452448 KIAA1210Q9ULL0 1709 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CLRN2A0PK11 232 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 LRRD1A4D1F6 860 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 F8W810 466 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 H3BUI4 141 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SGK1O00141 431 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SURF6O75683 361 aaKnown RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 F12P00748 615 aaPredicted RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CD4P01730 458 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 GLAP06280 429 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CHRNB1P11230 501 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 APEHP13798 732 aaKnown RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 GBP1P32455 592 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 ADH7P40394 386 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PHKA1P46020 1223 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 MAPKAPK2P49137 400 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 GTF2A2P52657 109 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 OTUD4Q01804 1114 aaKnown RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PPFIA1Q13136 1202 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SUPT20HL1Q3ZLR7 823 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 FUT11Q495W5 492 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 TPGS2Q68CL5 300 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CCDC102BQ68D86 513 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 ALG1LQ6GMV1 187 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 RFPL4BQ6ZWI9 263 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 RNF180Q86T96 592 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 EPHX4Q8IUS5 362 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SLC22A9Q8IVM8 553 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 ZNF619Q8N2I2 560 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 DDI1Q8WTU0 396 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 NSMCE1Q8WV22 266 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 COL26A1Q96A83 441 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 FAM149B1Q96BN6 582 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 TNIP3Q96KP6 325 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SPON2Q9BUD6 331 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SPZ1Q9BXG8 430 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 KRT23Q9C075 422 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 GHITMQ9H3K2 345 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 NCOR1P1Q9H4R4 102 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 ELAC1Q9H777 363 aaKnown RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 DMAP1Q9NPF5 467 aaPredicted RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SENP1Q9P0U3 644 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 VPS18Q9P253 973 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CRNNQ9UBG3 495 aaPredicted RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PPARGC1AQ9UBK2 798 aaKnown RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 BAG5Q9UL15 447 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 USP20Q9Y2K6 914 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PCDHB4Q9Y5E5 795 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 VWDEQ8N2E2 1590 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 LRP5O75197 1615 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SENP3-EIF4A1A0A087X0R7 540 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 C9IYK1 514 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PDPK1O15530 556 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 TSC22D2O75157 780 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SOCS5O75159 536 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 TNFRSF21O75509 655 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 USP1O94782 785 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 LUC7L3O95232 432 aaKnown RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CAPNS1P04632 268 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 POLR3DP05423 398 aaPredicted RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PDHBP11177 359 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PYGMP11217 842 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CYP2C9P11712 490 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PORP16435 677 aaPredicted RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CASTP20810 708 aaKnown RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SYT1P21579 422 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 RXRBP28702 533 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 EIF1AXP47813 144 aaKnown RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 POLE2P56282 527 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 NLRP5P59047 1200 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PPP2R2AP63151 447 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 STILQ15468 1287 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SLC14A2Q15849 920 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 MAPKAPK3Q16644 382 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 PLA2G2CQ5R387 149 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 DEPDC1Q5TB30 811 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CLEC2AQ6UVW9 174 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 TOGARAM2Q6ZUX3 1019 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 MRPL10Q7Z7H8 261 aaKnown RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 NRSN1Q8IZ57 195 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 SLC38A6Q8IZM9 456 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 ANKRD35Q8N283 1001 aa5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CBARPQ8N350 705 aaPredicted RBP5.3□□□□□ -1.56
EPHA3-202ENST00000452448 CSGALNACT2Q8N6G5 542 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms