RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 IGSF9Q9P2J2 1179 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 TNFSF13BQ9Y275 285 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 N4BP1O75113 896 aaKnown RBP23.12■■□□□ 1.29
VSX1-206ENST00000444511 NUBP1P53384 320 aa23.12■■□□□ 1.29
VSX1-206ENST00000444511 ZRSR1Q15695 479 aaKnown RBP23.12■■□□□ 1.29
VSX1-206ENST00000444511 PSMD5Q16401 504 aa23.12■■□□□ 1.29
VSX1-206ENST00000444511 GLRA4Q5JXX5 417 aa23.12■■□□□ 1.29
VSX1-206ENST00000444511 RUSC1Q9BVN2 902 aa23.12■■□□□ 1.29
VSX1-206ENST00000444511 PRKD2Q9BZL6 878 aa23.12■■□□□ 1.29
VSX1-206ENST00000444511 IRF2BPLQ9H1B7 796 aa23.12■■□□□ 1.29
VSX1-206ENST00000444511 KMT5AQ9NQR1 393 aa23.12■■□□□ 1.29
VSX1-206ENST00000444511 C2orf16Q68DN1 1984 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 H3BQV1 296 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 ZMYND10O75800 440 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 PAPLNO95428 1278 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 YARSP54577 528 aaKnown RBP23.11■■□□□ 1.29
VSX1-206ENST00000444511 ZNF568Q3ZCX4 644 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 RINT1Q6NUQ1 792 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 PDXDC1Q6P996 788 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 DAW1Q8N136 415 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 LNX1Q8TBB1 728 aaPredicted RBP23.11■■□□□ 1.29
VSX1-206ENST00000444511 TMX3Q96JJ7 454 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 PHOX2BQ99453 314 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 CLSTN3Q9BQT9 956 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 MMTAG2Q9BU76 263 aaKnown RBP23.11■■□□□ 1.29
VSX1-206ENST00000444511 CCDC94Q9BW85 323 aaPredicted RBP23.11■■□□□ 1.29
VSX1-206ENST00000444511 MRPL4Q9BYD3 311 aaKnown RBP23.11■■□□□ 1.29
VSX1-206ENST00000444511 TMEM134Q9H6X4 195 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 UPF2Q9HAU5 1272 aaKnown RBP23.11■■□□□ 1.29
VSX1-206ENST00000444511 DUSP12Q9UNI6 340 aa23.11■■□□□ 1.29
VSX1-206ENST00000444511 RBM19Q9Y4C8 960 aaKnown RBP23.11■■□□□ 1.29
VSX1-206ENST00000444511 B3GAT3O94766 335 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 ATP2C1P98194 919 aaPredicted RBP23.1■■□□□ 1.29
VSX1-206ENST00000444511 LIN9Q5TKA1 542 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.1■■□□□ 1.29
VSX1-206ENST00000444511 C1orf186Q6ZWK4 172 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 KCNK18Q7Z418 384 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 UROC1Q96N76 676 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 PPP1R10Q96QC0 940 aaKnown RBP23.1■■□□□ 1.29
VSX1-206ENST00000444511 ACO2Q99798 780 aaKnown RBP23.1■■□□□ 1.29
VSX1-206ENST00000444511 CDT1Q9H211 546 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 C17orf75Q9HAS0 396 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 TOPORSQ9NS56 1045 aaPredicted RBP23.1■■□□□ 1.29
VSX1-206ENST00000444511 ARHGAP28Q9P2N2 729 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 EPS15L1Q9UBC2 864 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 FBXW11Q9UKB1 542 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 FBXL21Q9UKT6 434 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 MYO10Q9HD67 2058 aa23.1■■□□□ 1.29
VSX1-206ENST00000444511 GJB2P29033 226 aa23.09■■□□□ 1.29
VSX1-206ENST00000444511 GRM5P41594 1212 aa23.09■■□□□ 1.29
VSX1-206ENST00000444511 ASTLQ6HA08 431 aaPredicted RBP23.09■■□□□ 1.29
VSX1-206ENST00000444511 DCLRE1AQ6PJP8 1040 aa23.09■■□□□ 1.29
VSX1-206ENST00000444511 TMEM105Q8N8V8 129 aa23.09■■□□□ 1.29
VSX1-206ENST00000444511 CEP120Q8N960 986 aa23.09■■□□□ 1.29
VSX1-206ENST00000444511 FLCNQ8NFG4 579 aa23.09■■□□□ 1.29
VSX1-206ENST00000444511 MYADMQ96S97 322 aa23.09■■□□□ 1.29
VSX1-206ENST00000444511 TCHPQ9BT92 498 aa23.09■■□□□ 1.29
VSX1-206ENST00000444511 TIPINQ9BVW5 301 aa23.09■■□□□ 1.29
VSX1-206ENST00000444511 TARS2Q9BW92 718 aaKnown RBP23.09■■□□□ 1.29
VSX1-206ENST00000444511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.09■■□□□ 1.29
VSX1-206ENST00000444511 TMEM189-UBE2V1I3L0A0 370 aa23.08■■□□□ 1.29
VSX1-206ENST00000444511 GALR2O43603 387 aaPredicted RBP23.08■■□□□ 1.29
VSX1-206ENST00000444511 CLCNKBP51801 687 aa23.08■■□□□ 1.29
VSX1-206ENST00000444511 OSTNP61366 133 aa23.08■■□□□ 1.29
VSX1-206ENST00000444511 MAPK7Q13164 816 aa23.08■■□□□ 1.29
VSX1-206ENST00000444511 GET4Q7L5D6 327 aaPredicted RBP23.08■■□□□ 1.29
VSX1-206ENST00000444511 RSAD2Q8WXG1 361 aa23.08■■□□□ 1.29
VSX1-206ENST00000444511 ATOH1Q92858 354 aaPredicted RBP23.08■■□□□ 1.29
VSX1-206ENST00000444511 PTPRHQ9HD43 1115 aa23.08■■□□□ 1.29
VSX1-206ENST00000444511 FAM86C1Q9NVL1 165 aa23.08■■□□□ 1.29
VSX1-206ENST00000444511 SMIM28A0A1B0GU29 152 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 VWA3AA6NCI4 1184 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 SFI1A8K8P3 1242 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 SLC16A4O15374 487 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 TRAPPC3O43617 180 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 HNRNPA1P09651 372 aaKnown RBP eCLIP23.07■■□□□ 1.28
VSX1-206ENST00000444511 FGFR3P22607 806 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 GUCY2CP25092 1073 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 CLCN5P51795 746 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 RAD51AP2Q09MP3 1159 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 PPM1LQ5SGD2 360 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 TAS1R3Q7RTX0 852 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 CDK5RAP3Q96JB5 506 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 GOLGA2P5Q9HBQ8 144 aa23.07■■□□□ 1.28
VSX1-206ENST00000444511 H0Y858 1186 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 ADAM12O43184 909 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 NARSO43776 548 aaKnown RBP23.06■■□□□ 1.28
VSX1-206ENST00000444511 CD2BP2O95400 341 aaKnown RBP23.06■■□□□ 1.28
VSX1-206ENST00000444511 C8AP07357 584 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 MCF2P10911 925 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 MCM2P49736 904 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 STRN3Q13033 797 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 UPP1Q16831 310 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 HYIQ5T013 277 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 SIX5Q8N196 739 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 KCTD17Q8N5Z5 321 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 NXPE3Q969Y0 559 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 PNMA5Q96PV4 448 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 PLIN2Q99541 437 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 SLC38A7Q9NVC3 462 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms