RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 MTIF2P46199 727 aaKnown RBP12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 ENPEPQ07075 957 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 MBTPS1Q14703 1052 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 MAPK6Q16659 721 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 FAM187BQ17R55 369 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 ZNF618Q5T7W0 954 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 SLFN12LQ6IEE8 588 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 ARMCX5Q6P1M9 558 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 TAF2Q6P1X5 1199 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 TRIM59Q8IWR1 403 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 KIAA0319LQ8IZA0 1049 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 C7orf31Q8N865 590 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 PRIMPOLQ96LW4 560 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 NAP1L5Q96NT1 182 aaPredicted RBP12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 NSUN3Q9H649 340 aaKnown RBP12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 INTS13Q9NVM9 706 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 TAB2Q9NYJ8 693 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 IMPACTQ9P2X3 320 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 HDAC6Q9UBN7 1215 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 GTF2IRD1Q9UHL9 959 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 FRMD4BQ9Y2L6 1034 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 CFAP54Q96N23 3096 aa12.77□□□□□ -0.36
AC009404.1-202ENST00000439955 A0A1W2PQC6 194 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 H3BNC9 293 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 CLIC2O15247 247 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 EFCAB14O75071 495 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 AKAP3O75969 853 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 UPP2O95045 317 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 AMHP03971 560 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 LIG4P49917 911 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 GPC3P51654 580 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 MCCD1P59942 119 aaPredicted RBP12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 HTRA4P83105 476 aaPredicted RBP12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 ZNF200P98182 395 aaPredicted RBP12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 COL19A1Q14993 1142 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 PCBP1Q15365 356 aaKnown RBP eCLIP12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 VWA3BQ502W6 1294 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 TRAF7Q6Q0C0 670 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 VSTM4Q8IW00 320 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 SUGP1Q8IWZ8 645 aaKnown RBP12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 NME8Q8N427 588 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 XXYLT1Q8NBI6 393 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 DBF4BQ8NFT6 615 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 BICD1Q96G01 975 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 BORCS6Q96GS4 357 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 YME1L1Q96TA2 773 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 MRPL4Q9BYD3 311 aaKnown RBP12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 VPS16Q9H269 839 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 FZD8Q9H461 694 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 IFT122Q9HBG6 1241 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 KIAA1586Q9HCI6 787 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 ARMCX3Q9UH62 379 aaPredicted RBP12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 AKT3Q9Y243 479 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 ITIH6Q6UXX5 1313 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 TRIOO75962 3097 aa12.77□□□□□ -0.37
AC009404.1-202ENST00000439955 ZNF318Q5VUA4 2279 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 ANKRD63C9JTQ0 380 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 ACKR2O00590 384 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 MBTPS2O43462 519 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 EXOC3O60645 756 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 PRKCBP05771 671 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 SRGAP2CP0DJJ0 459 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 GTF2F1P35269 517 aaKnown RBP eCLIP12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 PBX1P40424 430 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 CYP2J2P51589 502 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 MBTD1Q05BQ5 628 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 RBL2Q08999 1139 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 SMAD2Q15796 467 aaKnown RBP12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 TRIM71Q2Q1W2 868 aaKnown RBP12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 HS1BP3Q53T59 392 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 MIIPQ5JXC2 388 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 CEP135Q66GS9 1140 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 SLC39A4Q6P5W5 647 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 TRIM67Q6ZTA4 783 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 TMEM192Q8IY95 271 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 FAM186BQ8IYM0 893 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 EEF2KMTQ96G04 330 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 NLRP4Q96MN2 994 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 POP1Q99575 1024 aaKnown RBP12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 CBWD1Q9BRT8 395 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 NDST4Q9H3R1 872 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 IGFLR1Q9H665 355 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 HSPBP1Q9NZL4 362 aa12.76□□□□□ -0.37
AC009404.1-202ENST00000439955 C5orf42Q9H799 3197 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 LINC01565O15544 149 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 TOM1L1O75674 476 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 PARNO95453 639 aaKnown RBP12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 ADSSP30520 456 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 CASP4P49662 377 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 HYAL1Q12794 435 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 TRIM14Q14142 442 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 HIC1Q14526 733 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 SPECC1LQ69YQ0 1117 aa12.75□□□□□ -0.37
AC009404.1-202ENST00000439955 TSHZ1Q6ZSZ6 1077 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms