RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 C17orf102A2RUQ5 167 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 RRN3P2A6NIE6 340 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 GOLGA6L22H0YM25 854 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 ARVCFO00192 962 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 MSTNO14793 375 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 SLC26A4O43511 780 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 F2P00734 622 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 IGHA1P01876 353 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 HOXD8P13378 290 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 NPR3P17342 541 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 NAT1P18440 290 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 MUTP22033 750 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 RPA1P27694 616 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 PSMC6P62333 389 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 CYP4A11Q02928 519 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 PTPN11Q06124 597 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 PLEKHG6Q3KR16 790 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 XKR3Q5GH77 459 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 ZNF484Q5JVG2 852 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 C1QTNF12Q5T7M4 302 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 CCSAPQ6IQ19 270 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 CC2D1AQ6P1N0 951 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 B3GNT9Q6UX72 402 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 CCDC73Q6ZRK6 1079 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 CCDC60Q8IWA6 550 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 C4orf19Q8IY42 314 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 GIPC2Q8TF65 315 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 LEO1Q8WVC0 666 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 BORCS6Q96GS4 357 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 NACC1Q96RE7 527 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 PCYT2Q99447 389 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 LXNQ9BS40 222 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 C16orf70Q9BSU1 422 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 POLR3CQ9BUI4 534 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 HTATIP2Q9BUP3 242 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 RGL1Q9NZL6 768 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 FBXO2Q9UK22 296 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 RCOR1Q9UKL0 485 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 ODF2LQ9ULJ1 636 aa6.82□□□□□ -1.32
ECHDC1-208ENST00000436638 MROH7Q68CQ1 1323 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 NRCAMQ92823 1304 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 IGSF9BQ9UPX0 1349 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 ARHGEF35A5YM69 484 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 PP2D1A8MPX8 630 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 DCDC2CA8MYV0 355 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 GOLGA6L6A8MZA4 724 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 C1QTNF9BB2RNN3 333 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 HAS3O00219 553 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 ICMTO60725 284 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 MED24O75448 989 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 SLITRK3O94933 977 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 IPO7O95373 1038 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 ITGB2P05107 769 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 SMIM10L2AP0DMW4 78 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 SMIM10L2BP0DMW5 78 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 CDC25AP30304 524 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 YWHABP31946 246 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 RAC1P63000 192 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 PRKCEQ02156 737 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 SPIRE1Q08AE8 756 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 PPFIA1Q13136 1202 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 PLCB4Q15147 1175 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 IL17AQ16552 155 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 MTERF2Q49AM1 385 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 XKR9Q5GH70 373 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 SPECC1Q5M775 1068 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 RRAGBQ5VZM2 374 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 ADALQ6DHV7 355 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 GDF6Q6KF10 455 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 NFRKBQ6P4R8 1299 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 SLC39A5Q6ZMH5 540 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 MTERF4Q7Z6M4 381 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 CATSPER3Q86XQ3 398 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 WFDC8Q8IUA0 241 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 FMNL3Q8IVF7 1028 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 GLYCTKQ8IVS8 523 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 IGSF22Q8N9C0 903 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 DIS3LQ8TF46 1054 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 ATP8B4Q8TF62 1192 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 CCDC34Q96HJ3 373 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 CEP170P1Q96L14 293 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 CLIC6Q96NY7 704 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 PLIN2Q99541 437 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 JPH2Q9BR39 696 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 PYM1Q9BRP8 204 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 GTPBP4Q9BZE4 634 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 CCSER1Q9C0I3 900 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 LRRC27Q9C0I9 530 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 ANKEF1Q9NU02 776 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 HDAC6Q9UBN7 1215 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 PCDHA7Q9UN72 937 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 DNM3Q9UQ16 869 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 ATP11BQ9Y2G3 1177 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 TELO2Q9Y4R8 837 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 COL1A2P08123 1366 aa6.81□□□□□ -1.32
ECHDC1-208ENST00000436638 A0A0A0MRY4 1105 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 MAGEB2O15479 319 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 PQBP1O60828 265 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 LYPLA2O95372 231 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 SSBP05455 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms