RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 KLHDC7AQ5VTJ3 777 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 KCTD16Q68DU8 428 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 HPS3Q969F9 1004 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 C18orf8Q96DM3 657 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 FAM217BQ9NTX9 383 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 A0A0A6YYK5 440 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-208ENST00000430669 CLTAP09496 248 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 PNPLA4P41247 253 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 NPEPPSP55786 919 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 GIT2Q14161 759 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 ATF7IP2Q5U623 682 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-208ENST00000430669 GPC2Q8N158 579 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 SLC5A5Q92911 643 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 SCYL1Q96KG9 808 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 KCND1Q9NSA2 647 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 SENP1Q9P0U3 644 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 C4orf22Q6V702 233 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 RAPH1Q70E73 1250 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 WDR24Q96S15 920 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 ZWILCHQ9H900 591 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 PRKAG2Q9UGJ0 569 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 SRGAP2O75044 1071 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 KRT37O76014 449 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 TM4SF1P30408 202 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 ROR1Q01973 937 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 R3HDM1Q15032 1099 aaKnown RBP12.25□□□□□ -0.45
PTCH1-208ENST00000430669 TRIM56Q9BRZ2 755 aaKnown RBP12.25□□□□□ -0.45
PTCH1-208ENST00000430669 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
PTCH1-208ENST00000430669 SYNJ2BP-COX16A0A087WUM0 186 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 TRAPPC3O43617 180 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 PGBD4Q96DM1 585 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 FAM96AQ9H5X1 160 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 COX16Q9P0S2 106 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 SCN7AQ01118 1682 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 COL22A1Q8NFW1 1626 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-208ENST00000430669 PDE1BQ01064 536 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 TMED2Q15363 201 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 SV2CQ496J9 727 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 PPP1R12CQ9BZL4 782 aa12.25□□□□□ -0.45
PTCH1-208ENST00000430669 DDR1Q08345 913 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 MAPK8IP2Q13387 824 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 CDKL3Q8IVW4 592 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 FAF2Q96CS3 445 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 ZMYND15Q9H091 742 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 CXCL11O14625 94 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 PSTPIP1O43586 416 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 SUPT20HL2P0C7V6 817 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 SLC12A3P55017 1021 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 ACTR5Q9H9F9 607 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 APOL1O14791 398 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 MT-ND3P03897 115 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 S100BP04271 92 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 TMEM253P0C7T8 217 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 PON1P27169 355 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 SPARCL1Q14515 664 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 GLYCTKQ8IVS8 523 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 CA4P22748 312 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 PMS2P54278 862 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 TADA2BQ86TJ2 420 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 ATL2Q8NHH9 583 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 CTIFO43310 598 aaKnown RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 ST3GAL1Q11201 340 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 RPS6KA2Q15349 733 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 ITPRIPL1Q6GPH6 555 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 LRRC31Q6UY01 552 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 RUSC1Q9BVN2 902 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 NGRNQ9NPE2 291 aaKnown RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 TIAM2Q8IVF5 1701 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 KPNA6O60684 536 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 ATP5HO75947 161 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 FAM102AQ5T9C2 384 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 COG1Q8WTW3 980 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 MAGEB5Q9BZ81 275 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 MED24O75448 989 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 DCTN3O75935 186 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 THOC5Q13769 683 aaKnown RBP12.24□□□□□ -0.45
PTCH1-208ENST00000430669 EFHC2Q5JST6 749 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 APPL2Q8NEU8 664 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 TMEM143Q96AN5 459 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 PLIN4Q96Q06 1357 aa12.24□□□□□ -0.45
PTCH1-208ENST00000430669 CYP26A1O43174 497 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 HSPA8P11142 646 aaKnown RBP12.23□□□□□ -0.45
PTCH1-208ENST00000430669 CYP4F22Q6NT55 531 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 SLC8A2Q9UPR5 921 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-208ENST00000430669 CDO1Q16878 200 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 EFCAB12Q6NXP0 572 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 ATG4CQ96DT6 458 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 EHD2Q9NZN4 543 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 FRMPD4Q14CM0 1322 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 DDTLA6NHG4 134 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-208ENST00000430669 WNT10BO00744 389 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 KRT38O76015 456 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 SERPINB6P35237 376 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 MTF1Q14872 753 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 LRIG3Q6UXM1 1119 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms