RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 MAFFQ9ULX9 164 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 SRPK3Q9UPE1 567 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 A0A1W2PPH5 198 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 PGPEP1LA6NFU8 196 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 F5H0A9 414 aaPredicted RBP5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ACKR2O00590 384 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 DTNBO60941 627 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 GSNP06396 782 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 VAV1P15498 845 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 LSP1P33241 339 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 HSPA7P48741 367 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ALDH9A1P49189 494 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 NCKAP1LP55160 1127 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 GPR85P60893 370 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 DCTN1Q14203 1278 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 SMC1AQ14683 1233 aaKnown RBP5.65□□□□□ -1.51
GABPB1-204ENST00000396464 SMAD2Q15796 467 aaKnown RBP5.65□□□□□ -1.51
GABPB1-204ENST00000396464 PKN2Q16513 984 aaKnown RBP5.65□□□□□ -1.51
GABPB1-204ENST00000396464 MPEG1Q2M385 716 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ZACNQ401N2 412 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 HLA-DQA1Q5Y7H0 255 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 CRTC3Q6UUV7 619 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 IGDCC3Q8IVU1 814 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 TMEFF1Q8IYR6 380 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 CISD2Q8N5K1 135 aaKnown RBP5.65□□□□□ -1.51
GABPB1-204ENST00000396464 LINC01356Q8N9X3 169 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 SYT8Q8NBV8 401 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ZFPM2Q8WW38 1151 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ERCC4Q92889 916 aaPredicted RBP5.65□□□□□ -1.51
GABPB1-204ENST00000396464 BAG1Q99933 345 aaPredicted RBP5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ZFYVE21Q9BQ24 234 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 C22orf23Q9BZE7 217 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ZDHHC5Q9C0B5 715 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ABCG4Q9H172 646 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 CCDC68Q9H2F9 335 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 NOL6Q9H6R4 1146 aaKnown RBP5.65□□□□□ -1.51
GABPB1-204ENST00000396464 EPB41L4AQ9HCS5 686 aaPredicted RBP5.65□□□□□ -1.51
GABPB1-204ENST00000396464 DACT1Q9NYF0 836 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ACSL6Q9UKU0 697 aa5.65□□□□□ -1.51
GABPB1-204ENST00000396464 ZC3H12DA2A288 527 aaKnown RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 HOXC11O43248 304 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 USO1O60763 962 aaKnown RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 TADA3O75528 432 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 SOAT2O75908 522 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 BAG2O95816 211 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 GSTM1P09488 218 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 CEBPAP49715 358 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 DNM2P50570 870 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 ITGA8P53708 1063 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 SMAD3P84022 425 aaKnown RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 KRT32Q14532 448 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 TARBP2Q15633 366 aaKnown RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 PFKFB4Q16877 469 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 TOR2AQ5JU69 321 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 NOL9Q5SY16 702 aaKnown RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 RPTNQ6XPR3 784 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 RASGRP2Q7LDG7 609 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 DAAM2Q86T65 1068 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 GALNT15Q8N3T1 639 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 CCDC33Q8N5R6 958 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 KREMEN2Q8NCW0 462 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 BRI3BPQ8WY22 251 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 RIN2Q8WYP3 895 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 COA7Q96BR5 231 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 RRP36Q96EU6 259 aaKnown RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 TEPSINQ96N21 525 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 UNKQ9C0B0 810 aaKnown RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 JMJD4Q9H9V9 463 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 TNFRSF12AQ9NP84 129 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 PRR13Q9NZ81 148 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 CFDP1Q9UEE9 299 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 DBR1Q9UK59 544 aaKnown RBP5.64□□□□□ -1.51
GABPB1-204ENST00000396464 SIK3Q9Y2K2 1263 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 PCDHA5Q9Y5H7 936 aa5.64□□□□□ -1.51
GABPB1-204ENST00000396464 GPRASP1Q5JY77 1395 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 CCDC66A2RUB6 948 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 KRT37O76014 449 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 SLC3A2P08195 630 aaKnown RBP5.63□□□□□ -1.51
GABPB1-204ENST00000396464 HARSP12081 509 aaKnown RBP5.63□□□□□ -1.51
GABPB1-204ENST00000396464 MYCLP12524 364 aaPredicted RBP5.63□□□□□ -1.51
GABPB1-204ENST00000396464 HNRNPLP14866 589 aaKnown RBP eCLIP5.63□□□□□ -1.512e-7■■■■□ 24.6
GABPB1-204ENST00000396464 SLC9A1P19634 815 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 MAPKAPK2P49137 400 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 PSMC1P62191 440 aaKnown RBP5.63□□□□□ -1.51
GABPB1-204ENST00000396464 PLP2Q04941 152 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 PAK1Q13153 545 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 SURF1Q15526 300 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 SLC35G1Q2M3R5 365 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 PLEKHN1Q494U1 663 aaPredicted RBP5.63□□□□□ -1.51
GABPB1-204ENST00000396464 LMBR1LQ6UX01 489 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 OTOP1Q7RTM1 612 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 VSIG1Q86XK7 387 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 CPOQ8IVL8 374 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 PPIL6Q8IXY8 311 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 THEMISQ8N1K5 641 aaPredicted RBP5.63□□□□□ -1.51
GABPB1-204ENST00000396464 OTUD6BQ8N6M0 293 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 RNF152Q8N8N0 203 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 C2orf69Q8N8R5 385 aa5.63□□□□□ -1.51
GABPB1-204ENST00000396464 ZNF610Q8N9Z0 462 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms