RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 FAM167AQ96KS9 214 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 FNBP1Q96RU3 617 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 NAP1L3Q99457 506 aaPredicted RBP9.72□□□□□ -0.85
TDP1-202ENST00000393452 PAGR1Q9BTK6 254 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 TARS2Q9BW92 718 aaKnown RBP9.72□□□□□ -0.85
TDP1-202ENST00000393452 TXNRD2Q9NNW7 524 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 C1orf112Q9NSG2 853 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 RNF181Q9P0P0 153 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 RBPJLQ9UBG7 517 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 FAM153AQ9UHL3 310 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 PTPRJQ12913 1337 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 LGR5O75473 907 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 VNN1O95497 513 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 HLA-DRAP01903 254 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 PTENP60484 403 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 PPP2R5EQ16537 467 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 ACAD10Q6JQN1 1059 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 IFT81Q8WYA0 676 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 CDCA5Q96FF9 252 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 ZBTB45Q96K62 511 aaPredicted RBP9.72□□□□□ -0.85
TDP1-202ENST00000393452 FAM84AQ96KN4 292 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 FHDC1Q9C0D6 1143 aaPredicted RBP9.72□□□□□ -0.85
TDP1-202ENST00000393452 PLEKHA4Q9H4M7 779 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 FAM204AQ9H8W3 233 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 SPON1Q9HCB6 807 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 UVRAGQ9P2Y5 699 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 TRPC6Q9Y210 931 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 NR2E1Q9Y466 385 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 CNTNAP2Q9UHC6 1331 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 IGKV6-21A0A0C4DH24 114 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 DCAF8L1A6NGE4 600 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 GAS2O43903 313 aaKnown RBP9.71□□□□□ -0.85
TDP1-202ENST00000393452 ARIH2O95376 493 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 UNGP13051 313 aaPredicted RBP9.71□□□□□ -0.85
TDP1-202ENST00000393452 TNNI1P19237 187 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 HSPA9P38646 679 aaKnown RBP9.71□□□□□ -0.85
TDP1-202ENST00000393452 PEX5P50542 639 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 LY6KQ17RY6 165 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 CLEC16AQ2KHT3 1053 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 Q3C1V9 767 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 LMBRD2Q68DH5 695 aaPredicted RBP9.71□□□□□ -0.85
TDP1-202ENST00000393452 ZPBP2Q6X784 338 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 MOB2Q70IA6 237 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 MAATS1Q7Z4T9 603 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 ZNF677Q86XU0 584 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 CCDC26Q8TAB7 109 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 ZC3H15Q8WU90 426 aaKnown RBP9.71□□□□□ -0.85
TDP1-202ENST00000393452 BBXQ8WY36 941 aaPredicted RBP9.71□□□□□ -0.85
TDP1-202ENST00000393452 ELMO3Q96BJ8 720 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 L3MBTL3Q96JM7 780 aaPredicted RBP9.71□□□□□ -0.85
TDP1-202ENST00000393452 MPHOSPH6Q99547 160 aaKnown RBP9.71□□□□□ -0.85
TDP1-202ENST00000393452 GPR20Q99678 358 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 ZSWIM1Q9BR11 485 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 CCDC113Q9H0I3 377 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 WNT8AQ9H1J5 351 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 RBAKQ9NYW8 714 aaPredicted RBP9.71□□□□□ -0.85
TDP1-202ENST00000393452 AMACRQ9UHK6 382 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 PCDHB2Q9Y5E7 798 aa9.71□□□□□ -0.85
TDP1-202ENST00000393452 ZBTB42B2RXF5 422 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 ATMINO43313 823 aaPredicted RBP9.71□□□□□ -0.86
TDP1-202ENST00000393452 FAM189A1O60320 539 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 MSCO60682 206 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 ACO1P21399 889 aaKnown RBP9.71□□□□□ -0.86
TDP1-202ENST00000393452 COMTP21964 271 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 NF2P35240 595 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 EFNA5P52803 228 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 DRP2Q13474 957 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 HSDL1Q3SXM5 330 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 WDR44Q5JSH3 913 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 ZBTB41Q5SVQ8 909 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 CELF3Q5SZQ8 465 aaKnown RBP9.71□□□□□ -0.86
TDP1-202ENST00000393452 CDCA2Q69YH5 1023 aaPredicted RBP9.71□□□□□ -0.86
TDP1-202ENST00000393452 USP50Q70EL3 339 aaPredicted RBP9.71□□□□□ -0.86
TDP1-202ENST00000393452 EEPD1Q7L9B9 569 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 PLPPR4Q7Z2D5 763 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 UBL4BQ8N7F7 174 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 ZNF564Q8TBZ8 553 aaPredicted RBP9.71□□□□□ -0.86
TDP1-202ENST00000393452 PRPF31Q8WWY3 499 aaKnown RBP9.71□□□□□ -0.86
TDP1-202ENST00000393452 KRT35Q92764 455 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 ZNF653Q96CK0 615 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 CGRRF1Q99675 332 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 MSTO1Q9BUK6 570 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 NUP85Q9BW27 656 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 AZI2Q9H6S1 392 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 CNTN6Q9UQ52 1028 aa9.71□□□□□ -0.86
TDP1-202ENST00000393452 LOC102724159A0A0B4J2E5 919 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 FAM170AA1A519 330 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 TULP1O00294 542 aaPredicted RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 OPA1O60313 960 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 HSF2BPO75031 334 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 PGK2P07205 417 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 KRT5P13647 590 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 HSPA6P17066 643 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 MARCKSL1P49006 195 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 LMAN1P49257 510 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 BPIFB4P59827 614 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 MKRN4PQ13434 485 aaPredicted RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 MESDQ14696 234 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 PWP2Q15269 919 aaKnown RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 IER5Q5VY09 327 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms