RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 DNERQ8NFT8 737 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 SYN2Q92777 582 aaPredicted RBP20.86■□□□□ 0.93
PCDH8-202ENST00000377942 SUPT20HL2P0C7V6 817 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 NME3Q13232 169 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 NTRK3Q16288 839 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 NT5C1AQ9BXI3 368 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 NIF3L1Q9GZT8 377 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 SKIP12755 728 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 TAC1P20366 129 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 PNPLA4P41247 253 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 ERGIC2Q96RQ1 377 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 PIDD1Q9HB75 910 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 HSD17B4P51659 736 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 CCDC38Q502W7 563 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 RCOR2Q8IZ40 523 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 PPP1R12AO14974 1030 aaPredicted RBP20.85■□□□□ 0.93
PCDH8-202ENST00000377942 ACADSBP45954 432 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 NOP14P78316 857 aaKnown RBP20.85■□□□□ 0.93
PCDH8-202ENST00000377942 ADCY1Q08828 1119 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 GPC2Q8N158 579 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 TARS2Q9BW92 718 aaKnown RBP20.85■□□□□ 0.93
PCDH8-202ENST00000377942 CAPN7Q9Y6W3 813 aa20.85■□□□□ 0.93
PCDH8-202ENST00000377942 PPP1R3GB7ZBB8 358 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 NCK2O43639 380 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 TOM1L1O75674 476 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 OAZ1P54368 228 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 GALCP54803 685 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 NAB2Q15742 525 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 CD302Q8IX05 232 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 PLAAQ9Y263 795 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 KRT14P02533 472 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 RAD51Q06609 339 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 RASGRP2Q7LDG7 609 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 VGLL2Q8N8G2 317 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 CFAP61Q8NHU2 1237 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 SP110Q9HB58 689 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 LCP1P13796 627 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 ZKSCAN8Q15776 578 aaPredicted RBP20.84■□□□□ 0.93
PCDH8-202ENST00000377942 CCDC137Q6PK04 289 aaKnown RBP20.84■□□□□ 0.93
PCDH8-202ENST00000377942 DCP1BQ8IZD4 617 aaKnown RBP20.84■□□□□ 0.93
PCDH8-202ENST00000377942 CEP120Q8N960 986 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 PARD3BQ8TEW8 1205 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 RUBCNQ92622 972 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 EXOC4Q96A65 974 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 SENP7Q9BQF6 1050 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 DDX47Q9H0S4 455 aaKnown RBP20.84■□□□□ 0.93
PCDH8-202ENST00000377942 AGPAT3Q9NRZ7 376 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 DNAJC17Q9NVM6 304 aaKnown RBP20.84■□□□□ 0.93
PCDH8-202ENST00000377942 USH1CQ9Y6N9 552 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 C17orf102A2RUQ5 167 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 CHEK2O96017 543 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 GRIN1Q05586 938 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 PIGHQ14442 188 aaPredicted RBP20.84■□□□□ 0.93
PCDH8-202ENST00000377942 SYDE1Q6ZW31 735 aaPredicted RBP20.84■□□□□ 0.93
PCDH8-202ENST00000377942 PPP2R3CQ969Q6 453 aa20.84■□□□□ 0.93
PCDH8-202ENST00000377942 FARP1Q9Y4F1 1045 aaPredicted RBP20.84■□□□□ 0.93
PCDH8-202ENST00000377942 APOL1O14791 398 aa20.83■□□□□ 0.93
PCDH8-202ENST00000377942 ZWINTO95229 277 aa20.83■□□□□ 0.93
PCDH8-202ENST00000377942 DSG3P32926 999 aa20.83■□□□□ 0.93
PCDH8-202ENST00000377942 FAM8A1Q9UBU6 413 aa20.83■□□□□ 0.93
PCDH8-202ENST00000377942 FHOD1Q9Y613 1164 aa20.83■□□□□ 0.93
PCDH8-202ENST00000377942 GRIK1P39086 918 aa20.83■□□□□ 0.93
PCDH8-202ENST00000377942 NAMPTP43490 491 aa20.83■□□□□ 0.93
PCDH8-202ENST00000377942 SNF8Q96H20 258 aa20.83■□□□□ 0.93
PCDH8-202ENST00000377942 RNPC3Q96LT9 517 aaKnown RBP20.83■□□□□ 0.93
PCDH8-202ENST00000377942 CASQ2O14958 399 aaPredicted RBP20.83■□□□□ 0.93
PCDH8-202ENST00000377942 PDCD2LQ9BRP1 358 aa20.83■□□□□ 0.93
PCDH8-202ENST00000377942 WNT10BO00744 389 aa20.83■□□□□ 0.92
PCDH8-202ENST00000377942 COPEO14579 308 aa20.83■□□□□ 0.92
PCDH8-202ENST00000377942 HSPA8P11142 646 aaKnown RBP20.83■□□□□ 0.92
PCDH8-202ENST00000377942 NLRP11P59045 1033 aaKnown RBP20.83■□□□□ 0.92
PCDH8-202ENST00000377942 SYTL5Q8TDW5 730 aaPredicted RBP20.83■□□□□ 0.92
PCDH8-202ENST00000377942 GANCQ8TET4 914 aa20.83■□□□□ 0.92
PCDH8-202ENST00000377942 CHP1Q99653 195 aa20.83■□□□□ 0.92
PCDH8-202ENST00000377942 TAF1DQ9H5J8 278 aaPredicted RBP20.83■□□□□ 0.92
PCDH8-202ENST00000377942 PRDM5Q9NQX1 630 aaPredicted RBP20.83■□□□□ 0.92
PCDH8-202ENST00000377942 PXMP2Q9NR77 195 aa20.83■□□□□ 0.92
PCDH8-202ENST00000377942 PPME1Q9Y570 386 aa20.83■□□□□ 0.92
PCDH8-202ENST00000377942 SH3TC2Q8TF17 1288 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 SLC4A9Q96Q91 983 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 NKRFO15226 690 aaKnown RBP eCLIP20.82■□□□□ 0.92
PCDH8-202ENST00000377942 MED24O75448 989 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 MOCS2O96007 188 aaPredicted RBP20.82■□□□□ 0.92
PCDH8-202ENST00000377942 ARP10275 920 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 PDGFRAP16234 1089 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 GPS1Q13098 491 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 SPARCL1Q14515 664 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 FBXO38Q6PIJ6 1188 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 DCLK2Q8N568 766 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 KBTBD4Q9NVX7 518 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 SNX12Q9UMY4 172 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 TGFB3P10600 412 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 SLC9A1P19634 815 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 FXR1P51114 621 aaKnown RBP eCLIP20.82■□□□□ 0.92
PCDH8-202ENST00000377942 TTC19Q6DKK2 380 aaPredicted RBP20.82■□□□□ 0.92
PCDH8-202ENST00000377942 APOBEC3HQ6NTF7 200 aaKnown RBP20.82■□□□□ 0.92
PCDH8-202ENST00000377942 C4orf19Q8IY42 314 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 ATL2Q8NHH9 583 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 SIK2Q9H0K1 926 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 UBQLN1Q9UMX0 589 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms