RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 SNF8Q96H20 258 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.14■□□□□ 0.492e-6■■■□□ 14.6
MCF2L-203ENST00000375604 DYRK4Q9NR20 520 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 SUN2Q9UH99 717 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 PDHBP11177 359 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 PNMA6AP0CW24 399 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-203ENST00000375604 ACBD5Q5T8D3 534 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-203ENST00000375604 TGS1Q96RS0 853 aaKnown RBP18.14■□□□□ 0.49
MCF2L-203ENST00000375604 MYMKA6NI61 221 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 PRRG1O14668 218 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 GYG2O15488 501 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 ALX1Q15699 326 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 CERKQ8TCT0 537 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 RPS6KA5O75582 802 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 KCNJ6P48051 423 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 ATP11CQ8NB49 1132 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 TUFT1Q9NNX1 390 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 ABCA6Q8N139 1617 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 FZD1Q9UP38 647 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 PNPLA7Q6ZV29 1317 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 SMARCA1P28370 1054 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 CSE1LP55060 971 aaKnown RBP18.13■□□□□ 0.49
MCF2L-203ENST00000375604 VEPH1Q14D04 833 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 RHOT1Q8IXI2 618 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 ABTB1Q969K4 478 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-203ENST00000375604 ELMO3Q96BJ8 720 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 TRIM55Q9BYV6 548 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 DIS3Q9Y2L1 958 aaKnown RBP18.13■□□□□ 0.49
MCF2L-203ENST00000375604 HMGB1P1B2RPK0 211 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-203ENST00000375604 PGK2P07205 417 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 HUNKP57058 714 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 EXOSC10Q01780 885 aaKnown RBP18.13■□□□□ 0.49
MCF2L-203ENST00000375604 ZNF34Q8IZ26 560 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 ARHGEF40Q8TER5 1519 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 SNRNP35Q16560 246 aaKnown RBP18.13■□□□□ 0.49
MCF2L-203ENST00000375604 ACAD11Q709F0 780 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 ATG4CQ96DT6 458 aa18.13■□□□□ 0.49
MCF2L-203ENST00000375604 NCOA4Q13772 614 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 USP49Q70CQ1 688 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 DEFB132Q7Z7B7 95 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 HASPINQ8TF76 798 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 PRMT1Q99873 361 aaKnown RBP18.12■□□□□ 0.49
MCF2L-203ENST00000375604 UNC45AQ9H3U1 944 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 RASA1P20936 1047 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 ALDH18A1P54886 795 aaKnown RBP18.12■□□□□ 0.49
MCF2L-203ENST00000375604 POLE2P56282 527 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 PABPC5Q96DU9 382 aaKnown RBP18.12■□□□□ 0.49
MCF2L-203ENST00000375604 GOLPH3Q9H4A6 298 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 CDK17Q00537 523 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 FBXO41Q8TF61 875 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 CPB2Q96IY4 423 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 BTBD6Q96KE9 485 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 DEFB129Q9H1M3 183 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 ZFYVE28Q9HCC9 887 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 FARP1Q9Y4F1 1045 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-203ENST00000375604 MRPL42Q9Y6G3 142 aaKnown RBP18.12■□□□□ 0.49
MCF2L-203ENST00000375604 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 PRR23AA6NEV1 266 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 GH1P01241 217 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 EIF3BP55884 814 aaKnown RBP18.12■□□□□ 0.49
MCF2L-203ENST00000375604 EFHD1Q9BUP0 239 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 A0A087WUV0 522 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-203ENST00000375604 CHRNA3P32297 505 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 KIZQ2M2Z5 673 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 GOLGA7BQ2TAP0 167 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 P3H1Q32P28 736 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 SLC7A14Q8TBB6 771 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 TMEM60Q9H2L4 133 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 JMJD4Q9H9V9 463 aa18.12■□□□□ 0.49
MCF2L-203ENST00000375604 RNF17Q9BXT8 1623 aaKnown RBP18.11■□□□□ 0.49
MCF2L-203ENST00000375604 NTSR2O95665 410 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 EFHBQ8N7U6 833 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 TTC13Q8NBP0 860 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 SERPINI1Q99574 410 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 FBXO28Q9NVF7 368 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 KIF17Q9P2E2 1029 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 NPEPPSP55786 919 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 C16orf86Q6ZW13 317 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 SCG3Q8WXD2 468 aaKnown RBP18.11■□□□□ 0.49
MCF2L-203ENST00000375604 ELMO2Q96JJ3 720 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 WNT8AQ9H1J5 351 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 SCHIP1Q9P0W5 487 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-203ENST00000375604 KRT38O76015 456 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 NR3C2P08235 984 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 STMN1P16949 149 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 BRD2P25440 801 aaKnown RBP18.11■□□□□ 0.49
MCF2L-203ENST00000375604 GRIN1Q05586 938 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 C2CD6Q53TS8 623 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 C1orf146Q5VVC0 180 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 CRAMP1Q96RY5 1269 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 WDR24Q96S15 920 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 KRT7P08729 469 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 GUCY2CP25092 1073 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 DDX56Q9NY93 547 aaKnown RBP18.11■□□□□ 0.49
MCF2L-203ENST00000375604 DBR1Q9UK59 544 aaKnown RBP18.11■□□□□ 0.49
MCF2L-203ENST00000375604 LONRF1Q17RB8 773 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 ADCK2Q7Z695 626 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 NUDCD3Q8IVD9 361 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 ZNF560Q96MR9 790 aa18.11■□□□□ 0.49
MCF2L-203ENST00000375604 LRRC1Q9BTT6 524 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms