RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 BRWD1Q9NSI6 2320 aa11.25□□□□□ -0.61
CCNC-203ENST00000369220 TRIM49BA6NDI0 452 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 HOXA2O43364 376 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 RNASELQ05823 741 aaKnown RBP11.24□□□□□ -0.61
CCNC-203ENST00000369220 GRIN2CQ14957 1233 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 NAB2Q15742 525 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 ALKAL1Q6UXT8 129 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 HACE1Q8IYU2 909 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 GUF1Q8N442 669 aaKnown RBP11.24□□□□□ -0.61
CCNC-203ENST00000369220 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 NRDE2Q9H7Z3 1164 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 HSPBP1Q9NZL4 362 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 UBE4BO95155 1302 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 KIAA1671Q9BY89 1806 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 SMIM28A0A1B0GU29 152 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 TTC26A0AVF1 554 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 CASTOR2A6NHX0 329 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 MBD3O95983 291 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 CLTAP09496 248 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
CCNC-203ENST00000369220 ZCWPW2Q504Y3 356 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 EPC2Q52LR7 807 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 SPOUT1Q5T280 376 aaKnown RBP11.24□□□□□ -0.61
CCNC-203ENST00000369220 SLFN12LQ6IEE8 588 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 KLHL10Q6JEL2 608 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 HS2ST1Q7LGA3 356 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 ADSSL1Q8N142 457 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 C18orf25Q96B23 403 aaPredicted RBP11.24□□□□□ -0.61
CCNC-203ENST00000369220 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
CCNC-203ENST00000369220 INPPL1O15357 1258 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 GARTP22102 1010 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 CTNNB1P35222 781 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 CASP4P49662 377 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 YARSP54577 528 aaKnown RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 DPCR1Q3MIW9 517 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 SCARA3Q6AZY7 606 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 CAVIN1Q6NZI2 390 aaKnown RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 GDPD5Q8WTR4 605 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 BCL7CQ8WUZ0 217 aaPredicted RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 TGS1Q96RS0 853 aaKnown RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 PRDM12Q9H4Q4 367 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 UBN1Q9NPG3 1134 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 TOPORSQ9NS56 1045 aaPredicted RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 TUBGCP4Q9UGJ1 667 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 TDRD15B5MCY1 1934 aaKnown RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 LACTBL1A8MY62 500 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 PPP1R3GB7ZBB8 358 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 ITGB1P05556 798 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 ADRB2P07550 413 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 NFICP08651 508 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 SLC11A1P49279 550 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 GUCY2FP51841 1108 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 BCAR1P56945 870 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 DSC1Q08554 894 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 XKR4Q5GH76 650 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 URGCPQ8TCY9 931 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 HASPINQ8TF76 798 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 PPP1R10Q96QC0 940 aaKnown RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 MRPL9Q9BYD2 267 aaKnown RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 ALG13Q9NP73 1137 aaKnown RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 RBAKQ9NYW8 714 aaPredicted RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 CNTN3Q9P232 1028 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 PRG3Q9Y2Y8 225 aaPredicted RBP11.23□□□□□ -0.61
CCNC-203ENST00000369220 TRIOO75962 3097 aa11.23□□□□□ -0.61
CCNC-203ENST00000369220 NLRC5Q86WI3 1866 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 PTPRJQ12913 1337 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 PDXKO00764 312 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 EXTL3O43909 919 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 NR3C1P04150 777 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 THP07101 528 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 ERVK-21P61565 698 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 GRIK3Q13003 919 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 SNRNP35Q16560 246 aaKnown RBP11.22□□□□□ -0.61
CCNC-203ENST00000369220 ZNF697Q5TEC3 545 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 LMBRD2Q68DH5 695 aaPredicted RBP11.22□□□□□ -0.61
CCNC-203ENST00000369220 KCNT2Q6UVM3 1135 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 EFCAB13Q8IY85 973 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 COLGALT2Q8IYK4 626 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 GPD1LQ8N335 351 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 DEFB123Q8N688 67 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 KLHL23Q8NBE8 558 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 MED15Q96RN5 788 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 GZF1Q9H116 711 aaPredicted RBP11.22□□□□□ -0.61
CCNC-203ENST00000369220 RPF1Q9H9Y2 349 aaKnown RBP11.22□□□□□ -0.61
CCNC-203ENST00000369220 PDE11AQ9HCR9 933 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 TRAF3IP3Q9Y228 551 aa11.22□□□□□ -0.61
CCNC-203ENST00000369220 EXOC3O60645 756 aa11.21□□□□□ -0.61
CCNC-203ENST00000369220 LPXNO60711 386 aa11.21□□□□□ -0.61
CCNC-203ENST00000369220 GALTP07902 379 aa11.21□□□□□ -0.61
CCNC-203ENST00000369220 NR2F2P24468 414 aa11.21□□□□□ -0.61
CCNC-203ENST00000369220 DNAJB1P25685 340 aa11.21□□□□□ -0.61
CCNC-203ENST00000369220 BMPR1AP36894 532 aa11.21□□□□□ -0.61
CCNC-203ENST00000369220 OR1G1P47890 313 aa11.21□□□□□ -0.61
CCNC-203ENST00000369220 ALDH7A1P49419 539 aaKnown RBP11.21□□□□□ -0.61
CCNC-203ENST00000369220 STX17P56962 302 aa11.21□□□□□ -0.61
CCNC-203ENST00000369220 ANKRD40Q6AI12 368 aa11.21□□□□□ -0.61
CCNC-203ENST00000369220 JADE1Q6IE81 842 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms