RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 IPCEF1Q8WWN9 437 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 MAML1Q92585 1016 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 NKD2Q969F2 451 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 NKD1Q969G9 470 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 RSRC1Q96IZ7 334 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CENPOQ9BU64 300 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 EPB41L4AQ9HCS5 686 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 ATP8A2Q9NTI2 1148 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 ANKEF1Q9NU02 776 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 ZMYM5Q9UJ78 669 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM184BQ9ULE4 1060 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 COG5Q9UP83 839 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM50BQ9Y247 325 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 RRP7AQ9Y3A4 280 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 DAGLAQ9Y4D2 1042 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 PCDHGB3Q9Y5G1 929 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CSADQ9Y600 493 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CEP295Q9C0D2 2601 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 OTOFQ9HC10 1997 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 KMT2EQ8IZD2 1858 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PRAMEF27A3QJZ7 478 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 TMEM221A6NGB7 291 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 M0R296 226 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PDHXO00330 501 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 FANCGO15287 622 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 TLR3O15455 904 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 RNGTTO60942 597 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 GFPT2O94808 682 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 INMTO95050 263 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 BMP3P12645 472 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ATP6V1B1P15313 513 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 RPS2P15880 293 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ZKSCAN1P17029 563 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 MAP4P27816 1152 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CCND3P30281 292 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CYP2C19P33261 490 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 MPP1Q00013 466 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PDE4BQ07343 736 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SLC20A2Q08357 652 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 EIF2B5Q13144 721 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 G3BP1Q13283 466 aaKnown RBP eCLIP3.93□□□□□ -1.781e-11■■■□□ 15.6
ECHDC1-205ENST00000368295 MAP7Q14244 749 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 INPP5AQ14642 412 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PPP2R5BQ15173 497 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ARHGAP29Q52LW3 1261 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SGO2Q562F6 1265 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ZBTB37Q5TC79 503 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SYDE2Q5VT97 1194 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PAOXQ6QHF9 649 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 RTL10Q7L3V2 364 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SPRED2Q7Z698 418 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ANKRD18AQ8IVF6 992 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 AHI1Q8N157 1196 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ARMC10Q8N2F6 343 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ZNF507Q8TCN5 953 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SMCR8Q8TEV9 937 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CLIP3Q96DZ5 547 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 MOGAT1Q96PD6 335 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 KIF2CQ99661 725 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SLC13A1Q9BZW2 595 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CCDC8Q9H0W5 538 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ACSS3Q9H6R3 686 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SLC52A2Q9HAB3 445 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 DISC1Q9NRI5 854 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 TOPORSQ9NS56 1045 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SMC4Q9NTJ3 1288 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 MRGBPQ9NV56 204 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 INTS7Q9NVH2 962 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 RABL2AQ9UBK7 228 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PFDN2Q9UHV9 154 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CTNNA3Q9UI47 895 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 TRHDEQ9UKU6 1024 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ANKRD6Q9Y2G4 727 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 RAXQ9Y2V3 346 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SLC4A7Q9Y6M7 1214 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 COL4A1P02462 1669 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 COL4A3Q01955 1670 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 LOC400499M0QZD8 3231 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CLRN2A0PK11 232 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 GFRA2O00451 464 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 GABRDO14764 452 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 TNPO2O14787 897 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 BBOX1O75936 387 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 NPTXRO95502 500 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 HMGCRP04035 888 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 KCNA5P22460 613 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 ATP6V1E1P36543 226 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 NBL1P41271 181 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CSE1LP55060 971 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 MRPS35P82673 323 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PPFIA1Q13136 1202 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PPP2R5CQ13362 524 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 TTLL4Q14679 1199 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 GRM3Q14832 879 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SF3B3Q15393 1217 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CCNG2Q16589 344 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PTPN21Q16825 1174 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 MUM1Q2TAK8 710 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 FNDC3BQ53EP0 1204 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PPM1JQ5JR12 505 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms