RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 SRGNP10124 158 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 PFKLP17858 780 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 MECP2P51608 486 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 ZNF131P52739 623 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 EPHB1P54762 984 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 EIF5P55010 431 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 HUNKP57058 714 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 DSG1Q02413 1049 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 MORC3Q14149 939 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 TMEM177Q53S58 311 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 HSP90B2PQ58FF3 399 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 STEAP3Q658P3 488 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 KLHL10Q6JEL2 608 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 OLFM4Q6UX06 510 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 OVCH1Q7RTY7 1134 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 LRRC56Q8IYG6 542 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 GPC2Q8N158 579 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 ACRBPQ8NEB7 543 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 PPHLN1Q8NEY8 458 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 OR2W6PQ8NHA6 318 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 DACT3Q96B18 629 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 ALG1Q9BT22 464 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 SELENOOQ9BVL4 669 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 CELF4Q9BZC1 486 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 YY1AP1Q9H869 796 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 ZNF277Q9NRM2 450 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 SLC5A4Q9NY91 659 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 GTF2A1LQ9UNN4 478 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 LAMA2P24043 3122 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 SNED1Q8TER0 1413 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 CENPJQ9HC77 1338 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 TCRBV5S2A0A599 114 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 BRINP1O60477 761 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 TCEA3O75764 348 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 PLA2G1BP04054 148 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 SERPINB2P05120 415 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 COL6A2P12110 1019 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 PIK3CAP42336 1068 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 CRKLP46109 303 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 LIMS1P48059 325 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 PPM1FP49593 454 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 SCNN1BP51168 640 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 FOXO4P98177 505 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 SATB1Q01826 763 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 CACNB2Q08289 660 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 LRRC41Q15345 812 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 ZNF385BQ569K4 471 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 HYIQ5T013 277 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 RNF219Q5W0B1 726 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 TTLL5Q6EMB2 1281 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 RGMBQ6NW40 437 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 OTOP3Q7RTS5 596 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 NECAB2Q7Z6G3 386 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 B3GNT8Q7Z7M8 397 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 C14orf80Q86SX3 495 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 CPXCR1Q8N123 301 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 FAM26EQ8N5C1 309 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 ARRDC4Q8NCT1 418 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 PIP4K2CQ8TBX8 421 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 RAPGEF4Q8WZA2 1011 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 USP7Q93009 1102 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 ITFG2Q969R8 447 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 PAWRQ96IZ0 340 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 FAM210AQ96ND0 272 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 TOX2Q96NM4 488 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 MPHOSPH9Q99550 1183 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 TTC1Q99614 292 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 KCNJ15Q99712 375 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 ASPSCR1Q9BZE9 553 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 TRIM8Q9BZR9 551 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 SUDS3Q9H7L9 328 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 IFT22Q9H7X7 185 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 CD248Q9HCU0 757 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 SLC6A20Q9NP91 592 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 TMOD3Q9NYL9 352 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 IP6K2Q9UHH9 426 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 TAGLN3Q9UI15 199 aa5.84□□□□□ -1.47
ECHDC1-204ENST00000368292 CCDC66A2RUB6 948 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 NKRFO15226 690 aaKnown RBP eCLIP5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 NUAK1O60285 661 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 ZEB2O60315 1214 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 ALDH1L1O75891 902 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 C8BP07358 591 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 PYGMP11217 842 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 ADCYAP1R1P41586 468 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 TSPAN7P41732 249 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 CD151P48509 253 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 DNM2P50570 870 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 GPSM2P81274 684 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 IFT88Q13099 833 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 MTMR1Q13613 665 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 ERAP2Q6P179 960 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 CNKSR3Q6P9H4 555 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 SLC4A10Q6U841 1118 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 USP50Q70EL3 339 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 C16orf59Q7L2K0 433 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 TTC30AQ86WT1 665 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 FAM126BQ8IXS8 530 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms