RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MXI1P50539 228 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 NLRP11P59045 1033 aaKnown RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 POLR2FP61218 127 aaKnown RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 TERF2Q15554 542 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 AMHR2Q16671 573 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 FAM47CQ5HY64 1035 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 ATF7IP2Q5U623 682 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 KRT39Q6A163 491 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 PDXDC1Q6P996 788 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 MPZL3Q6UWV2 235 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 CRELD2Q6UXH1 353 aaPredicted RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 CCAR2Q8N163 923 aaKnown RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 ADAMTS10Q9H324 1103 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 TMEM8AQ9HCN3 771 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 SIX2Q9NPC8 291 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 PRDM5Q9NQX1 630 aaPredicted RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 HDAC6Q9UBN7 1215 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 COQ4Q9Y3A0 265 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 TRIP12Q14669 1992 aaPredicted RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 SZT2Q5T011 3432 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 LRRC53A6NM62 1247 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 OGTO15294 1046 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
USF1-203ENST00000368021 GCLMP48507 274 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 HIC1Q14526 733 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 EPC2Q52LR7 807 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 TAF2Q6P1X5 1199 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 RRAGAQ7L523 313 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 C17orf53Q8N3J3 647 aaPredicted RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 NME8Q8N427 588 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 LMO3Q8TAP4 145 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 CCDC127Q96BQ5 260 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 ZNF668Q96K58 619 aaPredicted RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 TCHPQ9BT92 498 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 TMEM117Q9H0C3 514 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 RBAKQ9NYW8 714 aaPredicted RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 NR2E3Q9Y5X4 410 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 ARVCFO00192 962 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 TREHO43280 583 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 ZSCAN12O43309 604 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 GPR32O75388 356 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 CABYRO75952 493 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 ACTN1P12814 892 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 ACOT2P49753 483 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 POU5F1Q01860 360 aaKnown RBP13.05□□□□□ -0.32
USF1-203ENST00000368021 NBPF20Q3BBV1 942 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 RAD9BQ6WBX8 426 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 SESTD1Q86VW0 696 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 CCDC170Q8IYT3 715 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 EHBP1Q8NDI1 1231 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 SCLT1Q96NL6 688 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 FNBP1Q96RU3 617 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 GCOM2Q9BZD3 368 aaPredicted RBP13.05□□□□□ -0.32
USF1-203ENST00000368021 AIPL1Q9NZN9 384 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 APEX2Q9UBZ4 518 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 GTF2IRD1Q9UHL9 959 aa13.05□□□□□ -0.32
USF1-203ENST00000368021 ALPK3Q96L96 1907 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 B4GALT5O43286 388 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 RPLP2P05387 115 aaKnown RBP13.04□□□□□ -0.32
USF1-203ENST00000368021 DLATP10515 647 aaKnown RBP13.04□□□□□ -0.32
USF1-203ENST00000368021 SNX17Q15036 470 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 RUFY4Q6ZNE9 571 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 C15orf39Q6ZRI6 1047 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 FMNL3Q8IVF7 1028 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 BRSK2Q8IWQ3 736 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 MYCBPQ99417 103 aaPredicted RBP13.04□□□□□ -0.32
USF1-203ENST00000368021 CHP1Q99653 195 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 INTS2Q9H0H0 1204 aaKnown RBP13.04□□□□□ -0.32
USF1-203ENST00000368021 FAM49AQ9H0Q0 323 aaPredicted RBP13.04□□□□□ -0.32
USF1-203ENST00000368021 NLRC4Q9NPP4 1024 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 GOLGA6L9A6NEM1 432 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 ERLIN2O94905 339 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 MCF2P10911 925 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 CDK7P50613 346 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 JAM2P57087 298 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 APBA1Q02410 837 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 SURF1Q15526 300 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 KYAT1Q16773 422 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 TMEM132AQ24JP5 1023 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 KIZQ2M2Z5 673 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 SFMBT2Q5VUG0 894 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 FBXL13Q8NEE6 735 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 SPAG5Q96R06 1193 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 PPP1R16BQ96T49 567 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 POP1Q99575 1024 aaKnown RBP13.04□□□□□ -0.32
USF1-203ENST00000368021 TRPV6Q9H1D0 765 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 TRMT13Q9NUP7 481 aaKnown RBP13.04□□□□□ -0.32
USF1-203ENST00000368021 CWC15Q9P013 229 aaKnown RBP13.04□□□□□ -0.32
USF1-203ENST00000368021 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 CPSF3Q9UKF6 684 aaKnown RBP13.04□□□□□ -0.32
USF1-203ENST00000368021 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
USF1-203ENST00000368021 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 SSU72P8A0A1W2PR75 194 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 USP27XA6NNY8 438 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 DCDC2CA8MYV0 355 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 TSPAN1O60635 241 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 CCDC175P0C221 793 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms