RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PPFIBP1Q86W92 1011 aa18.73■□□□□ 0.59
BRCC3-202ENST00000340647 KCNN1Q92952 543 aa18.73■□□□□ 0.59
BRCC3-202ENST00000340647 FIZ1Q96SL8 496 aa18.73■□□□□ 0.59
BRCC3-202ENST00000340647 ADPGKQ9BRR6 497 aa18.73■□□□□ 0.59
BRCC3-202ENST00000340647 TIPINQ9BVW5 301 aa18.73■□□□□ 0.59
BRCC3-202ENST00000340647 EMILIN2Q9BXX0 1053 aa18.73■□□□□ 0.59
BRCC3-202ENST00000340647 NT5C3AQ9H0P0 336 aa18.73■□□□□ 0.59
BRCC3-202ENST00000340647 GOLGA2P5Q9HBQ8 144 aa18.73■□□□□ 0.59
BRCC3-202ENST00000340647 MTMR6Q9Y217 621 aa18.73■□□□□ 0.59
BRCC3-202ENST00000340647 SMIM28A0A1B0GU29 152 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 ADAM12O43184 909 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 RFPL2O75678 378 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 SPATA31D3P0C874 917 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 PLCG1P19174 1290 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 USP41Q3LFD5 358 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 SPECC1Q5M775 1068 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 CES5AQ6NT32 575 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 SPATA31D4Q6ZUB0 917 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 GPR65Q8IYL9 337 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 LNX1Q8TBB1 728 aaPredicted RBP18.72■□□□□ 0.59
BRCC3-202ENST00000340647 ZNF707Q96C28 371 aaPredicted RBP18.72■□□□□ 0.59
BRCC3-202ENST00000340647 INTS4Q96HW7 963 aaKnown RBP18.72■□□□□ 0.59
BRCC3-202ENST00000340647 EPSTI1Q96J88 318 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 CLSTN3Q9BQT9 956 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 REEP2Q9BRK0 252 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 MRPL4Q9BYD3 311 aaKnown RBP18.72■□□□□ 0.59
BRCC3-202ENST00000340647 SMOC2Q9H3U7 446 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 MAN1C1Q9NR34 630 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 FBXO2Q9UK22 296 aaPredicted RBP18.72■□□□□ 0.59
BRCC3-202ENST00000340647 RBM19Q9Y4C8 960 aaKnown RBP18.72■□□□□ 0.59
BRCC3-202ENST00000340647 USP34Q70CQ2 3546 aa18.72■□□□□ 0.59
BRCC3-202ENST00000340647 SLC26A4O43511 780 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 TGM5O43548 720 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 N4BP1O75113 896 aaKnown RBP18.71■□□□□ 0.59
BRCC3-202ENST00000340647 TADA2AO75478 443 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 MTHFRP42898 656 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 CLCNKBP51801 687 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 ZNF131P52739 623 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 NCKAP1LP55160 1127 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 OSTNP61366 133 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 MCM6Q14566 821 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 UPP1Q16831 310 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 TMEM132AQ24JP5 1023 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 ZNF568Q3ZCX4 644 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 ZBTB33Q86T24 672 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 RIN2Q8WYP3 895 aaPredicted RBP18.71■□□□□ 0.59
BRCC3-202ENST00000340647 ASIC4Q96FT7 647 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 NECTIN4Q96NY8 510 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 CCSER1Q9C0I3 900 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 SFXN1Q9H9B4 322 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 FOXD4L1Q9NU39 408 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 KCND2Q9NZV8 630 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 FNIP2Q9P278 1114 aa18.71■□□□□ 0.59
BRCC3-202ENST00000340647 NR1I2O75469 434 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 MARCKSP29966 332 aaPredicted RBP18.7■□□□□ 0.58
BRCC3-202ENST00000340647 LONP1P36776 959 aaKnown RBP18.7■□□□□ 0.58
BRCC3-202ENST00000340647 SLC10A6Q3KNW5 377 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 SEZ6Q53EL9 994 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 ATAT1Q5SQI0 421 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 MPZL3Q6UWV2 235 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 RSPO2Q6UXX9 243 aaPredicted RBP18.7■□□□□ 0.58
BRCC3-202ENST00000340647 TRIM67Q6ZTA4 783 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 PALB2Q86YC2 1186 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 GLYCTKQ8IVS8 523 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 CMASQ8NFW8 434 aaPredicted RBP18.7■□□□□ 0.58
BRCC3-202ENST00000340647 RAD54LQ92698 747 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 SNX27Q96L92 541 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 RIPOR3Q96MK2 946 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 CLIC6Q96NY7 704 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 KCNH6Q9H252 994 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 SSX2IPQ9Y2D8 614 aa18.7■□□□□ 0.58
BRCC3-202ENST00000340647 ZDBF2Q9HCK1 2354 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 TMEM189-UBE2V1I3L0A0 370 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 FAM189A1O60320 539 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 ADH1AP07327 375 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 MCF2P10911 925 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 UBA7P41226 1012 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 DHX8Q14562 1220 aaKnown RBP18.69■□□□□ 0.58
BRCC3-202ENST00000340647 PTPN21Q16825 1174 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 FAM171A1Q5VUB5 890 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 GPBP1Q86WP2 473 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 TMEM87AQ8NBN3 555 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 PIK3R5Q8WYR1 880 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 TSHZ2Q9NRE2 1034 aa18.69■□□□□ 0.58
BRCC3-202ENST00000340647 I3L4J1 428 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 K7ELQ4 463 aaPredicted RBP18.68■□□□□ 0.58
BRCC3-202ENST00000340647 BMP15O95972 392 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 GLUD1P00367 558 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 C1RP00736 705 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 ASGR2P07307 311 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 KCNE1P15382 129 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 FGFR3P22607 806 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 SLC39A4Q6P5W5 647 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 C15orf39Q6ZRI6 1047 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 HAUS6Q7Z4H7 955 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 BMP8AQ7Z5Y6 402 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 ZDHHC14Q8IZN3 488 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 C18orf25Q96B23 403 aaPredicted RBP18.68■□□□□ 0.58
BRCC3-202ENST00000340647 CDK5RAP3Q96JB5 506 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 USP28Q96RU2 1077 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms