RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SLC16A4O15374 487 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 ZWINTO95229 277 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 USP46P62068 366 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 CCNJLQ8IV13 435 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 LRRC43Q8N309 656 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 SLC26A7Q8TE54 656 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 RMDN3Q96TC7 470 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 TRIM55Q9BYV6 548 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 PPARGC1AQ9UBK2 798 aaKnown RBP17.01■□□□□ 0.31
NPHP3-201ENST00000337331 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 GPC4O75487 556 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 OATP04181 439 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 ASPHQ12797 758 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 R3HDM1Q15032 1099 aaKnown RBP17.01■□□□□ 0.31
NPHP3-201ENST00000337331 SPRED3Q2MJR0 410 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 THNSL1Q8IYQ7 743 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 CATSPER2Q96P56 530 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 XAB2Q9HCS7 855 aaKnown RBP17.01■□□□□ 0.31
NPHP3-201ENST00000337331 SPECC1L-ADORA2AF8WAN1 911 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 PSAPP07602 524 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CPA2P48052 419 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 MTMR1Q13613 665 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 ZC3H12AQ5D1E8 599 aaKnown RBP17■□□□□ 0.31
NPHP3-201ENST00000337331 PPP1R18Q6NYC8 613 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 TLDC1Q6P9B6 456 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CENPUQ71F23 418 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CCDC80Q76M96 950 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 C11orf70Q9BRQ4 267 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 PTPRUQ92729 1446 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 VWDEQ8N2E2 1590 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 RHOBTB3O94955 611 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CCND2P30279 289 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 ITKQ08881 620 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 C16orf87Q6PH81 154 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 IZUMO2Q6UXV1 221 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 PASD1Q8IV76 773 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 DNAAF3Q8N9W5 541 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 ALG13Q9NP73 1137 aaKnown RBP17■□□□□ 0.31
NPHP3-201ENST00000337331 SAYSD1Q9NPB0 183 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 NGRNQ9NPE2 291 aaKnown RBP17■□□□□ 0.31
NPHP3-201ENST00000337331 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
NPHP3-201ENST00000337331 GINM1Q9NU53 330 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CLIC5Q9NZA1 410 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 DIS3Q9Y2L1 958 aaKnown RBP17■□□□□ 0.31
NPHP3-201ENST00000337331 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17■□□□□ 0.31
NPHP3-201ENST00000337331 NRXN1Q9ULB1 1477 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 ITGA4P13612 1032 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 GARSP41250 739 aaKnown RBP17■□□□□ 0.31
NPHP3-201ENST00000337331 RABGAP1LQ5R372 815 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 RNF207Q6ZRF8 634 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 TMC3Q7Z5M5 1100 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CCDC124Q96CT7 223 aaKnown RBP17■□□□□ 0.31
NPHP3-201ENST00000337331 NUB1Q9Y5A7 615 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 PXDNLA1KZ92 1463 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 NPTXRO95502 500 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CBX6O95503 412 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 NAB2Q15742 525 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 NT5DC1Q5TFE4 455 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 KLC3Q6P597 504 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 PODNQ7Z5L7 613 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CLEC10AQ8IUN9 316 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 MREGQ8N565 214 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CXorf38Q8TB03 319 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 FBXO25Q8TCJ0 367 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
NPHP3-201ENST00000337331 ECE1P42892 770 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 CDCA2Q69YH5 1023 aaPredicted RBP16.99■□□□□ 0.31
NPHP3-201ENST00000337331 ISLR2Q6UXK2 745 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 FAM192AQ9GZU8 254 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 BTBD7Q9P203 1132 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 TTC7AQ9ULT0 858 aaPredicted RBP16.99■□□□□ 0.31
NPHP3-201ENST00000337331 MAGED2Q9UNF1 606 aaPredicted RBP16.99■□□□□ 0.31
NPHP3-201ENST00000337331 A0A1B0GVG6 124 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 PDIA5Q14554 519 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 SLC18A3Q16572 532 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 HP1BP3Q5SSJ5 553 aaPredicted RBP16.99■□□□□ 0.31
NPHP3-201ENST00000337331 DCLK2Q8N568 766 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 TTC8Q8TAM2 541 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 NLRP4Q96MN2 994 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 ERP44Q9BS26 406 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 SEMA4AQ9H3S1 761 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 WDR35Q9P2L0 1181 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 SALL1Q9NSC2 1324 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 RAPH1Q70E73 1250 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 RNF25Q96BH1 459 aaPredicted RBP16.99■□□□□ 0.31
NPHP3-201ENST00000337331 ZWILCHQ9H900 591 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 LMCD1Q9NZU5 365 aa16.99■□□□□ 0.31
NPHP3-201ENST00000337331 IPO5O00410 1097 aaKnown RBP16.98■□□□□ 0.31
NPHP3-201ENST00000337331 PRPSAP2O60256 369 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 VAMP7P51809 220 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 ARFIP2P53365 341 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 MDH1BQ5I0G3 518 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 PCGF5Q86SE9 256 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 ZNF512BQ96KM6 892 aaPredicted RBP16.98■□□□□ 0.31
NPHP3-201ENST00000337331 PPP1R16BQ96T49 567 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 AGAP1Q9UPQ3 857 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 PREX1Q8TCU6 1659 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 PITPNM2Q9BZ72 1349 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 MROH1Q8NDA8 1641 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 O00370 1275 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms