RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 NLRP4Q96MN2 994 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 COPEO14579 308 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 TMEM253P0C7T8 217 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 CDC25CP30307 473 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 SHMT1P34896 483 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 NT5C2P49902 561 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 ARSEP51690 589 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 MDH1BQ5I0G3 518 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 DACT2Q5SW24 774 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 ATP6V0A1Q93050 837 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 VCX3AQ9NNX9 186 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 PFASO15067 1338 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 AKAP3O75969 853 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.42■□□□□ 0.38
SFXN1-201ENST00000321442 KRT39Q6A163 491 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 NME8Q8N427 588 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 ATL2Q8NHH9 583 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 SCFD1Q8WVM8 642 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 HSPH1Q92598 858 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 RTN2O75298 545 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 TNNC2P02585 160 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 PBX1P40424 430 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 RHBDL3P58872 404 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 IL17AQ16552 155 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 C1orf146Q5VVC0 180 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 SWSAP1Q6NVH7 229 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 ABTB1Q969K4 478 aaPredicted RBP17.42■□□□□ 0.38
SFXN1-201ENST00000321442 STAMBPL1Q96FJ0 436 aa17.42■□□□□ 0.38
SFXN1-201ENST00000321442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.42■□□□□ 0.38
SFXN1-201ENST00000321442 K7ERI5 159 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 ARL4CP56559 192 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 IFI35P80217 286 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-201ENST00000321442 KCNK18Q7Z418 384 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 ERICH1Q86X53 443 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 DCLK2Q8N568 766 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 MED15Q96RN5 788 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 UBN1Q9NPG3 1134 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 WNT10BO00744 389 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 MED24O75448 989 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 HOXA10P31260 410 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-201ENST00000321442 KIF22Q14807 665 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 CDAN1Q8IWY9 1227 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 SCYL1Q96KG9 808 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 FAM49AQ9H0Q0 323 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-201ENST00000321442 CYP4F11Q9HBI6 524 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 NGRNQ9NPE2 291 aaKnown RBP17.41■□□□□ 0.38
SFXN1-201ENST00000321442 WDR64B1ANS9 1081 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 ENTPD3O75355 529 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 MAP3K21Q5TCX8 1036 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 MAP7D3Q8IWC1 876 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 TMEM117Q9H0C3 514 aa17.41■□□□□ 0.38
SFXN1-201ENST00000321442 CSPG5O95196 566 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 PSMA2P25787 234 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 TARSP26639 723 aaKnown RBP17.4■□□□□ 0.38
SFXN1-201ENST00000321442 ITGA8P53708 1063 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 CAV1Q03135 178 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 KDSRQ06136 332 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 P3H1Q32P28 736 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 PCGF5Q86SE9 256 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 SPATA20Q8TB22 786 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 MTRQ99707 1265 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 GLIS2Q9BZE0 524 aaPredicted RBP17.4■□□□□ 0.38
SFXN1-201ENST00000321442 HEY1Q9Y5J3 304 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 IQANK1A0A1B0GTG1 560 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 F8VZ95 297 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 CCND1P24385 295 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 PPP1R18Q6NYC8 613 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 TRMT10CQ7L0Y3 403 aaKnown RBP17.4■□□□□ 0.38
SFXN1-201ENST00000321442 SUGP1Q8IWZ8 645 aaKnown RBP17.4■□□□□ 0.38
SFXN1-201ENST00000321442 FUKQ8N0W3 1084 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 NYAP2Q9P242 653 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 SLC8A3P57103 927 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 CEP55Q53EZ4 464 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 PPP6R3Q5H9R7 873 aaPredicted RBP17.4■□□□□ 0.38
SFXN1-201ENST00000321442 RHOT1Q8IXI2 618 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 MARCOQ9UEW3 520 aaPredicted RBP17.4■□□□□ 0.38
SFXN1-201ENST00000321442 FEM1BQ9UK73 627 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 ANGPTL2Q9UKU9 493 aa17.4■□□□□ 0.38
SFXN1-201ENST00000321442 COPS2P61201 443 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 SKOR1P84550 965 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 ASPHQ12797 758 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 ANKRD20A8PQ5CZ79 823 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 SLC17A8Q8NDX2 589 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 FBXL13Q8NEE6 735 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 FAM149B1Q96BN6 582 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 GABBR1Q9UBS5 961 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 SEL1LQ9UBV2 794 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 AKT3Q9Y243 479 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 FIS1Q9Y3D6 152 aa17.39■□□□□ 0.38
SFXN1-201ENST00000321442 FAM47DPA6NHR8 397 aa17.39■□□□□ 0.37
SFXN1-201ENST00000321442 F5H423 210 aaPredicted RBP17.39■□□□□ 0.37
SFXN1-201ENST00000321442 KLRC4O43908 158 aa17.39■□□□□ 0.37
SFXN1-201ENST00000321442 STAT4Q14765 748 aa17.39■□□□□ 0.37
SFXN1-201ENST00000321442 TRIM50Q86XT4 487 aa17.39■□□□□ 0.37
SFXN1-201ENST00000321442 ZBTB8OSQ8IWT0 167 aa17.39■□□□□ 0.37
SFXN1-201ENST00000321442 CCNYQ8ND76 341 aa17.39■□□□□ 0.37
SFXN1-201ENST00000321442 CDKL2Q92772 493 aa17.39■□□□□ 0.37
SFXN1-201ENST00000321442 FAM81BQ96LP2 452 aa17.39■□□□□ 0.37
SFXN1-201ENST00000321442 TUBB6Q9BUF5 446 aa17.39■□□□□ 0.37
SFXN1-201ENST00000321442 TRAIPQ9BWF2 469 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms