RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MRRFQ96E11 262 aaKnown RBP18.65■□□□□ 0.58
TRAM1-201ENST00000262213 SNF8Q96H20 258 aa18.65■□□□□ 0.58
TRAM1-201ENST00000262213 ZNF570Q96NI8 536 aa18.65■□□□□ 0.58
TRAM1-201ENST00000262213 R3HDM2Q9Y2K5 976 aaKnown RBP18.65■□□□□ 0.58
TRAM1-201ENST00000262213 SPAG7O75391 227 aa18.64■□□□□ 0.58
TRAM1-201ENST00000262213 ATF2P15336 505 aa18.64■□□□□ 0.58
TRAM1-201ENST00000262213 TMED2Q15363 201 aa18.64■□□□□ 0.58
TRAM1-201ENST00000262213 CGB2Q6NT52 195 aa18.64■□□□□ 0.58
TRAM1-201ENST00000262213 XXYLT1Q8NBI6 393 aa18.64■□□□□ 0.58
TRAM1-201ENST00000262213 LRRC19Q9H756 370 aa18.64■□□□□ 0.58
TRAM1-201ENST00000262213 TOPORSQ9NS56 1045 aaPredicted RBP18.64■□□□□ 0.58
TRAM1-201ENST00000262213 NKIRAS1Q9NYS0 192 aa18.64■□□□□ 0.58
TRAM1-201ENST00000262213 NINJ2Q9NZG7 142 aa18.64■□□□□ 0.58
TRAM1-201ENST00000262213 KLHL14Q9P2G3 628 aa18.64■□□□□ 0.58
TRAM1-201ENST00000262213 GREB1LQ9C091 1923 aaPredicted RBP18.64■□□□□ 0.57
TRAM1-201ENST00000262213 ZNF831Q5JPB2 1677 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 ADRB2P07550 413 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 POLR2MP0CAP2 368 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 KRT5P13647 590 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 ATP5DP30049 168 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 MAPK4P31152 587 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 CEP55Q53EZ4 464 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 CAPN12Q6ZSI9 719 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 FAM71AQ8IYT1 594 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 SLC17A8Q8NDX2 589 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 PSPC1Q8WXF1 523 aaKnown RBP18.64■□□□□ 0.57
TRAM1-201ENST00000262213 IFT74Q96LB3 600 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 ETNK1Q9HBU6 452 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 GPRC5CQ9NQ84 441 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 WHRNQ9P202 907 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 SUGT1Q9Y2Z0 365 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 SLC16A4O15374 487 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 CYP1A2P05177 515 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 CYP11B1P15538 503 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 MEX3CQ5U5Q3 659 aaKnown RBP18.64■□□□□ 0.57
TRAM1-201ENST00000262213 CBWD2Q8IUF1 395 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 SLC9A9Q8IVB4 645 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 CCHCR1Q8TD31 782 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 NAALADL1Q9UQQ1 740 aa18.64■□□□□ 0.57
TRAM1-201ENST00000262213 SSR1P43307 286 aaKnown RBP18.63■□□□□ 0.57
TRAM1-201ENST00000262213 LACTBP83111 547 aaPredicted RBP18.63■□□□□ 0.57
TRAM1-201ENST00000262213 SP8Q8IXZ3 490 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 GMCL1Q96IK5 515 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 FAXDC2Q96IV6 333 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 ACCSQ96QU6 501 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 FAM167BQ9BTA0 163 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 TEKT3Q9BXF9 490 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 TRIM6Q9C030 488 aaPredicted RBP18.63■□□□□ 0.57
TRAM1-201ENST00000262213 RXFP1Q9HBX9 757 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 LARSQ9P2J5 1176 aaKnown RBP18.63■□□□□ 0.57
TRAM1-201ENST00000262213 IPO5O00410 1097 aaKnown RBP18.63■□□□□ 0.57
TRAM1-201ENST00000262213 GZMAP12544 262 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 ITIH2P19823 946 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 FOXN2P32314 431 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 SSTR3P32745 418 aaPredicted RBP18.63■□□□□ 0.57
TRAM1-201ENST00000262213 GRIPAP1Q4V328 841 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 ECHDC2Q86YB7 292 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 SPOCK2Q92563 424 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 GTF3C4Q9UKN8 822 aa18.63■□□□□ 0.57
TRAM1-201ENST00000262213 O00370 1275 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 FSCN2O14926 492 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 GJB6O95452 261 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 MFAP3P55082 362 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 RHBDF2Q6PJF5 856 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 BZW1Q7L1Q6 419 aaKnown RBP18.62■□□□□ 0.57
TRAM1-201ENST00000262213 C12orf50Q8NA57 414 aaPredicted RBP18.62■□□□□ 0.57
TRAM1-201ENST00000262213 GMCL1P1Q8NEA9 526 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 MORC4Q8TE76 937 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 PI4K2AQ9BTU6 479 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 PITPNM3Q9BZ71 974 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 ARHGEF10LQ9HCE6 1279 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 ADAM22Q9P0K1 906 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 ZNF219Q9P2Y4 722 aaPredicted RBP18.62■□□□□ 0.57
TRAM1-201ENST00000262213 C10orf71Q711Q0 1435 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 CCND1P24385 295 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 PDE6BP35913 854 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 STAT2P52630 851 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 ATP11AP98196 1134 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 RNASELQ05823 741 aaKnown RBP18.62■□□□□ 0.57
TRAM1-201ENST00000262213 ZNF568Q3ZCX4 644 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 MIER3Q7Z3K6 550 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 GBP7Q8N8V2 638 aaPredicted RBP18.62■□□□□ 0.57
TRAM1-201ENST00000262213 TMEM237Q96Q45 408 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 KIFC3Q9BVG8 833 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 ARHGEF3Q9NR81 526 aa18.62■□□□□ 0.57
TRAM1-201ENST00000262213 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.62■□□□□ 0.57
TRAM1-201ENST00000262213 MTA2O94776 668 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 GAS8O95995 478 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 ADRA2BP18089 450 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 IVDP26440 423 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 HOXA10P31260 410 aaPredicted RBP18.61■□□□□ 0.57
TRAM1-201ENST00000262213 PEX3P56589 373 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 HAUS6Q7Z4H7 955 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 ACER1Q8TDN7 264 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 MICAL1Q8TDZ2 1067 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 CPA5Q8WXQ8 436 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 STRA6Q9BX79 667 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 PLVAPQ9BX97 442 aa18.61■□□□□ 0.57
TRAM1-201ENST00000262213 TDRD3Q9H7E2 651 aaKnown RBP18.61■□□□□ 0.57
TRAM1-201ENST00000262213 RASA4BC9J798 803 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms