RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 KCNMB3Q9NPA1 279 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 GJB4Q9NTQ9 266 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 FBXO4Q9UKT5 387 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 TPCN1Q9ULQ1 816 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 ZFP37Q9Y6Q3 630 aaPredicted RBP15.28■□□□□ 0.04
DDX39A-201ENST00000242776 SPTLC1O15269 473 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 CD2BP2O95400 341 aaKnown RBP15.27■□□□□ 0.04
DDX39A-201ENST00000242776 DEXIO95424 95 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 LIG1P18858 919 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 KCNA4P22459 653 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 PRKCQQ04759 706 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 MXD4Q14582 209 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-201ENST00000242776 TMEM132AQ24JP5 1023 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 ZNF528Q3MIS6 628 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 ZBTB41Q5SVQ8 909 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 PIK3AP1Q6ZUJ8 805 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 NEK8Q86SG6 692 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 LNX1Q8TBB1 728 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-201ENST00000242776 HAS1Q92839 578 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 CCDC43Q96MW1 224 aaKnown RBP15.27■□□□□ 0.04
DDX39A-201ENST00000242776 DDX23Q9BUQ8 820 aaKnown RBP15.27■□□□□ 0.04
DDX39A-201ENST00000242776 PLA2G2FQ9BZM2 168 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 ZSWIM4Q9H7M6 989 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 HEBP1Q9NRV9 189 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 NDRG2Q9UN36 371 aaKnown RBP15.27■□□□□ 0.04
DDX39A-201ENST00000242776 USP20Q9Y2K6 914 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 RBM19Q9Y4C8 960 aaKnown RBP15.27■□□□□ 0.04
DDX39A-201ENST00000242776 TRIP11Q15643 1979 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 EPG5Q9HCE0 2579 aa15.27■□□□□ 0.04
DDX39A-201ENST00000242776 PFKFB2O60825 505 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 XYLBO75191 536 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 PAPLNO95428 1278 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 GLRA2P23416 452 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 ME3Q16798 604 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 PABPC1LQ4VXU2 614 aaKnown RBP15.27■□□□□ 0.03
DDX39A-201ENST00000242776 AXDND1Q5T1B0 1012 aaPredicted RBP15.27■□□□□ 0.03
DDX39A-201ENST00000242776 SLC27A1Q6PCB7 646 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 CPLX2Q6PUV4 134 aaKnown RBP15.27■□□□□ 0.03
DDX39A-201ENST00000242776 NPAS3Q8IXF0 933 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 DAGLBQ8NCG7 672 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 POLR3FQ9H1D9 316 aaPredicted RBP15.27■□□□□ 0.03
DDX39A-201ENST00000242776 ZSCAN32Q9NX65 697 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 DNMT3BQ9UBC3 853 aaKnown RBP15.27■□□□□ 0.03
DDX39A-201ENST00000242776 PPME1Q9Y570 386 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 PCDHGA2Q9Y5H1 932 aa15.27■□□□□ 0.03
DDX39A-201ENST00000242776 RALGAPA1Q6GYQ0 2036 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 FAM205CA6NFA0 338 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 LRRIQ4A6NIV6 560 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 HNRNPA1P09651 372 aaKnown RBP eCLIP15.26■□□□□ 0.03
DDX39A-201ENST00000242776 IGFBP6P24592 240 aaPredicted RBP15.26■□□□□ 0.03
DDX39A-201ENST00000242776 OR1D2P34982 312 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 PFKPQ01813 784 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 TUSC3Q13454 348 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 GRM2Q14416 872 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 OXER1Q8TDS5 423 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 GTF3C6Q969F1 213 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 TMX3Q96JJ7 454 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 PARD6AQ9NPB6 346 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 GPRC5CQ9NQ84 441 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 SNTG2Q9NY99 539 aa15.26■□□□□ 0.03
DDX39A-201ENST00000242776 MRPS23Q9Y3D9 190 aaKnown RBP15.26■□□□□ 0.03
DDX39A-201ENST00000242776 USO1O60763 962 aaKnown RBP15.25■□□□□ 0.03
DDX39A-201ENST00000242776 CDKL5O76039 1030 aa15.25■□□□□ 0.03
DDX39A-201ENST00000242776 SLITRK3O94933 977 aa15.25■□□□□ 0.03
DDX39A-201ENST00000242776 LARGE1O95461 756 aa15.25■□□□□ 0.03
DDX39A-201ENST00000242776 SPEM2Q0P670 501 aa15.25■□□□□ 0.03
DDX39A-201ENST00000242776 MTAPQ13126 283 aa15.25■□□□□ 0.03
DDX39A-201ENST00000242776 PIGOQ8TEQ8 1089 aa15.25■□□□□ 0.03
DDX39A-201ENST00000242776 PIK3R5Q8WYR1 880 aa15.25■□□□□ 0.03
DDX39A-201ENST00000242776 EIF2AK1Q9BQI3 630 aaKnown RBP15.25■□□□□ 0.03
DDX39A-201ENST00000242776 TICRRQ7Z2Z1 1910 aa15.25■□□□□ 0.03
DDX39A-201ENST00000242776 ACACBO00763 2458 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 KMT2BQ9UMN6 2715 aaPredicted RBP15.24■□□□□ 0.03
DDX39A-201ENST00000242776 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 I3L4J1 428 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 C1RP00736 705 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 ARL2P36404 184 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 LMNB2Q03252 620 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 SCRN1Q12765 414 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 SLC5A9Q2M3M2 681 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 EARS2Q5JPH6 523 aaKnown RBP15.24■□□□□ 0.03
DDX39A-201ENST00000242776 PPP4R3AQ6IN85 833 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 NOSTRINQ8IVI9 506 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 ZBTB44Q8NCP5 570 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 EPC1Q9H2F5 836 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 GMEB2Q9UKD1 530 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 GDAQ9Y2T3 454 aa15.24■□□□□ 0.03
DDX39A-201ENST00000242776 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.24■□□□□ 0.03
DDX39A-201ENST00000242776 MAP1BP46821 2468 aaKnown RBP15.23■□□□□ 0.03
DDX39A-201ENST00000242776 A0A1B0GUA9 196 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 PTGESO14684 152 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 BAG4O95429 457 aaKnown RBP15.23■□□□□ 0.03
DDX39A-201ENST00000242776 THP07101 528 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 GCFC2P16383 781 aaKnown RBP15.23■□□□□ 0.03
DDX39A-201ENST00000242776 CEBPBP17676 345 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 SDHBP21912 280 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 SPIRE1Q08AE8 756 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 PCBP1Q15365 356 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDX39A-201ENST00000242776 GLRA4Q5JXX5 417 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 TANGO2Q6ICL3 276 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms