RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 EVI5O60447 810 aa21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 VAV2P52735 878 aa21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 GJA9P57773 515 aa21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 CACNB2Q08289 660 aaPredicted RBP21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 ARHGAP44Q17R89 818 aa21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 ZACNQ401N2 412 aa21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 ZNF410Q86VK4 478 aa21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 KATNAL1Q9BW62 490 aa21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 CARD6Q9BX69 1037 aa21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 FAM49AQ9H0Q0 323 aaPredicted RBP21.27■■□□□ 1
TNFRSF1A-201ENST00000162749 SEPT4O43236 478 aa21.27■□□□□ 0.99
TNFRSF1A-201ENST00000162749 GFPT2O94808 682 aa21.27■□□□□ 0.99
TNFRSF1A-201ENST00000162749 TMEM132AQ24JP5 1023 aa21.27■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ZNF571Q7Z3V5 609 aaPredicted RBP21.27■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SCLT1Q96NL6 688 aa21.27■□□□□ 0.99
TNFRSF1A-201ENST00000162749 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.27■□□□□ 0.993e-10■■■■■ 130.4
TNFRSF1A-201ENST00000162749 ADAMTS1Q9UHI8 967 aa21.27■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CPSF3Q9UKF6 684 aaKnown RBP21.27■□□□□ 0.99
TNFRSF1A-201ENST00000162749 PCDHA13Q9Y5I0 950 aa21.27■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SMIM35A0A1B0GVV1 85 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 KIF5CO60282 957 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 C4BPAP04003 597 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ELNP15502 786 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 FERP16591 822 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SLC18A3Q16572 532 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 KIZQ2M2Z5 673 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 GNASQ5JWF2 1037 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CCDC122Q5T0U0 273 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 TDRD10Q5VZ19 366 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CEP120Q8N960 986 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CGRRF1Q99675 332 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CDT1Q9H211 546 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 MRFAP1Q9Y605 127 aa21.26■□□□□ 0.99
TNFRSF1A-201ENST00000162749 A0A087X0T9 212 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SPDYE4A6NLX3 237 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 TADA3O75528 432 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 PGK1P00558 417 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 FAM228BP0C875 321 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 MAP2K2P36507 400 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 TMEM62Q0P6H9 643 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 PPM1KQ8N3J5 372 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 KAT5Q92993 513 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 JAKMIP2Q96AA8 810 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 GUCA1BQ9UMX6 200 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 FOXN3O00409 490 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 TREHO43280 583 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CYP2C9P11712 490 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ARF4P18085 180 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 VEGFBP49765 207 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 RUFY4Q6ZNE9 571 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 THNSL1Q8IYQ7 743 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ADAMTS10Q9H324 1103 aa21.25■□□□□ 0.99
TNFRSF1A-201ENST00000162749 KRT86O43790 486 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 HOXC8P31273 242 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CBX1P83916 185 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CD99L2Q8TCZ2 262 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 HELQQ8TDG4 1101 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 KREMEN1Q96MU8 473 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.24■□□□□ 0.996e-7■□□□□ 9.6
TNFRSF1A-201ENST00000162749 UPF3AQ9H1J1 476 aaKnown RBP21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 HDAC6Q9UBN7 1215 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SRRDQ9UH36 339 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 GPR32O75388 356 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 RARBP10826 455 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 PRKAR2AP13861 404 aaKnown RBP21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 H2AFXP16104 143 aaPredicted RBP21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ZNF200P98182 395 aaPredicted RBP21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SRGAP1Q7Z6B7 1085 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 FMNL3Q8IVF7 1028 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 OR5B17Q8NGF7 314 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ELMO3Q96BJ8 720 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CPB2Q96IY4 423 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 NT5C1BQ96P26 610 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 PI4K2AQ9BTU6 479 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 PDZD7Q9H5P4 517 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 GINS2Q9Y248 185 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 DUSP10Q9Y6W6 482 aa21.24■□□□□ 0.99
TNFRSF1A-201ENST00000162749 GPR25O00155 361 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 TSPAN1O60635 241 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CCND3P30281 292 aaPredicted RBP21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 KIF5AQ12840 1032 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 BIRC3Q13489 604 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ZNF569Q5MCW4 686 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 MNS1Q8NEH6 495 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 MYO1AQ9UBC5 1043 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 THSD7BQ9C0I4 1608 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 KPNA6O60684 536 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ERLIN2O94905 339 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 VNN1O95497 513 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 MAGEA1P43355 309 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 OSTNP61366 133 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 HTRA3P83110 453 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CDC42EP1Q00587 391 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 WDR49Q8IV35 697 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 C7orf31Q8N865 590 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 DNAJB3Q8WWF6 145 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 VTI1AQ96AJ9 217 aa21.23■□□□□ 0.99
TNFRSF1A-201ENST00000162749 C17orf102A2RUQ5 167 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 EFCAB8A8MWE9 144 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ZC3H11AO75152 810 aaKnown RBP eCLIP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms