RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Ttc13A0A1L1SSC7 844 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 DgkhD3YXJ0 1156 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Cdc6O89033 562 aaKnown RBP15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 SpoplQ2M2N2 392 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 CtcfQ61164 736 aaKnown RBP15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Jade1Q6ZPI0 834 aaKnown RBP15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Actn1Q7TPR4 892 aaKnown RBP15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Tmem220Q8BP07 167 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Sept8Q8CHH9 429 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 YarsQ91WQ3 528 aaKnown RBP15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Ttc1Q91Z38 292 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Erp44Q9D1Q6 406 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 FignQ9ERZ6 759 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Dnajc12Q9R022 198 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Gm45861A0A1B0GRY3 1923 aa15.88■□□□□ 0.13
Ercc1-201ENSMUST00000003645 BC025446A0A087WQT1 134 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Odf2A3KGV1 830 aaKnown RBP15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Unc13dB2RUP2 1085 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Xpnpep3B7ZMP1 506 aaKnown RBP15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Arhgef26D3YYY8 869 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Vmn2r15L7N2A0 855 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Alkbh1P0CB42 389 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Sparcl1P70663 650 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Bach2P97303 839 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Plk1Q07832 603 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Cd163Q2VLH6 1121 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Cyth4Q80YW0 393 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Slc2a12Q8BFW9 622 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 B3glctQ8BHT6 489 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Pkn2Q8BWW9 983 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Hgh1Q8C3I8 393 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Q8CCC3 530 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Tlcd1Q99JT6 247 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Zfyve19Q9DAZ9 389 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Vmn1r65Q9EPS7 332 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Extl1Q9JKV7 669 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Rnf25Q9QZR0 456 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Cd97Q9Z0M6 818 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 HttP42859 3119 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 1700016G14RikA0A286YCZ6 238 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Ptpn3A2ALK8 913 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 PtgisO35074 501 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 JchainP01592 159 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Gpr25P0C5I1 358 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Dpep1P31428 410 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 DsppP97399 934 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 EnahQ03173 802 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Fam109bQ14B98 259 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Znf235Q61116 645 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Shc3Q61120 474 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 CyldQ80TQ2 952 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Crb2Q80YA8 1282 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Necab1Q8BG18 352 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Arid5bQ8BM75 1188 aaKnown RBP15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 AsphQ8BSY0 741 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Serpina3bQ8BYY9 420 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Dnttip2Q8R2M2 758 aaKnown RBP15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Eml3Q8VC03 897 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Klhl20Q8VCK5 604 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Mtmr6Q8VE11 617 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 MutyhQ99P21 515 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Fam133bQ9CVI2 245 aaKnown RBP15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Lman1Q9D0F3 517 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Rbm31yQ9D3U4 565 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Lrrc71Q9D3W5 558 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Kcnq4Q9JK97 696 aa15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Atp6v0a1Q9Z1G4 839 aaKnown RBP15.87■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Gm42715A0A087WP63 3095 aaKnown RBP15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Dock3Q8CIQ7 2027 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Gm4756A0A140LIS8 335 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Vmn2r1O70410 912 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Tnnc2P20801 160 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Pcsk1P63239 753 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Pnma2Q8BHK0 365 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Zbtb9Q8CDC7 459 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Cog3Q8CI04 820 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Vwa1Q8R2Z5 415 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 DarsQ922B2 501 aaKnown RBP15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Mfap3lQ9D3X9 409 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Ccdc94Q9D6J3 314 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Tmem86aQ9D8N3 241 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Rfx5Q9JL61 658 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Fbxo17Q9QZM8 286 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Kank3Q9Z1P7 791 aa15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Uso1Q9Z1Z0 959 aaKnown RBP15.86■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Kntc1Q8C3Y4 2207 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Gm45713A0A1B0GS68 446 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Akap17bA2A3V1 959 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 2010300C02RikE9Q3M9 1175 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 TnfP06804 235 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Pde6bP23440 856 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Ercc5P35689 1170 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Col6a1Q04857 1025 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Dpcr1Q3TNW5 500 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Nek10Q3UGM2 1111 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Rnpc3Q3UZ01 514 aaKnown RBP15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Rhox12Q4TU81 186 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Zcchc2Q69ZB8 1166 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Wscd1Q80XH4 572 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Gtf2a2Q80ZM7 109 aa15.85■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms