RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 EMP3P54852 163 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ALDH18A1P54886 795 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CARD18P57730 90 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SSTP61278 116 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 FKBP4Q02790 459 aaKnown RBP eCLIP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 GBE1Q04446 702 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CALCOCO2Q13137 446 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 BTG3Q14201 252 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 TRIM25Q14258 630 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC102BQ68D86 513 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 TMC5Q6UXY8 1006 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 BEND4Q6ZU67 534 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CEP68Q76N32 757 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 NAT8LQ8N9F0 302 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SUPT20HQ8NEM7 779 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 DQX1Q8TE96 717 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 NSUN6Q8TEA1 469 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF566Q969W8 418 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC127Q96BQ5 260 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD36BP1Q96IX9 119 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SAMD11Q96NU1 681 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 TSGA13Q96PP4 275 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 NDNQ99608 321 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ADAM33Q9BZ11 813 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 MIS12Q9H081 205 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 RAD21L1Q9H4I0 556 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF287Q9HBT7 754 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 WDR35Q9P2L0 1181 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 MTMR6Q9Y217 621 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ZFHX4Q86UP3 3567 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 DLC1Q96QB1 1528 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 STX16-NPEPL1H3BU86 382 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 J3KRW8 73 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ENO2P09104 434 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 LTA4HP09960 611 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 AKR1B1P15121 316 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 GARTP22102 1010 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ATXN3P54252 364 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CDC16Q13042 620 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CFAP221Q4G0U5 840 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 OLFML2BQ68BL8 750 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 TRIM65Q6PJ69 517 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 PPP1R42Q7Z4L9 355 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 RIC3Q7Z5B4 369 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SLFN12Q8IYM2 578 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 PDZD8Q8NEN9 1154 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 RNF139Q8WU17 664 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 EXT2Q93063 718 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 GIMAP5Q96F15 307 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 PACSIN1Q9BY11 444 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 HAUS4Q9H6D7 363 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CAAP1Q9H8G2 361 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 NOP53Q9NZM5 478 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SLAIN2Q9P270 581 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 HMGXB4Q9UGU5 601 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 TRPS1Q9UHF7 1281 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SAP30BPQ9UHR5 308 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 GGA2Q9UJY4 613 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CFL2Q9Y281 166 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 RWDD3Q9Y3V2 267 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 KIF1BO60333 1816 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 MAP3K5Q99683 1374 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 NWD2Q9ULI1 1742 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PLCH1Q4KWH8 1693 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 C16orf96A6NNT2 1141 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 LACTBL1A8MY62 500 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TLR3O15455 904 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SSX5O60225 188 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PHACTR2O75167 634 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MICAL2O94851 1124 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 F2P00734 622 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 UBL4AP11441 157 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MAPKAPK2P49137 400 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 AMPHP49418 695 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 COPB1P53618 953 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ADAM17P78536 824 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD20A8PQ5CZ79 823 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ARSHQ5FYA8 562 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD20A2Q5SQ80 823 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD20A3Q5VUR7 823 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PDE12Q6L8Q7 609 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ANO5Q75V66 913 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ATG9AQ7Z3C6 839 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 EPHX4Q8IUS5 362 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC33Q8N5R6 958 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TBC1D19Q8N5T2 526 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD53Q8N9V6 530 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 FBXO41Q8TF61 875 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ATP8B4Q8TF62 1192 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KIFC2Q96AC6 838 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SUCLG2Q96I99 432 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MLPHQ9BV36 600 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KANSL2Q9H9L4 492 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CLK4Q9HAZ1 481 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 NTN4Q9HB63 628 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 HAUS2Q9NVX0 235 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KBTBD4Q9NVX7 518 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 HYPKQ9NX55 129 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PCDHB3Q9Y5E6 796 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms