RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 STAMBPL1Q96FJ0 436 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 PAWRQ96IZ0 340 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 CHAMP1Q96JM3 812 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 CCSER1Q9C0I3 900 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ADA2Q9NZK5 511 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 IQSEC2Q5JU85 1478 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 MYH6P13533 1939 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 A0A087WWV3 80 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 PRAMEF22A3QJZ6 481 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 TWF2Q6IBS0 349 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 APLFQ8IW19 511 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 STAG2Q8N3U4 1231 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 SYN2Q92777 582 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 CMTM5Q96DZ9 223 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 SENP7Q9BQF6 1050 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 CFAP69A5D8W1 941 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ZBBXA8MT70 800 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 KRT8P05787 483 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 RXRBP28702 533 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 HADHAP40939 763 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ARSEP51690 589 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 UGP2Q16851 508 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ANKS3Q6ZW76 656 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 RASGRP2Q7LDG7 609 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 AGGF1Q8N302 714 aaeCLIP4.83□□□□□ -1.645e-8■■■■□ 20.3
CHD9-221ENST00000615216 AFG1LQ8WV93 481 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 TNIP3Q96KP6 325 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 VPS11Q9H270 941 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 PSMC3IPQ9P2W1 217 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 APEX2Q9UBZ4 518 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ZNF609O15014 1411 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 EMSYQ7Z589 1322 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 TBX3O15119 743 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 NNMTP40261 264 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 NEK2P51955 445 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 ANO4Q32M45 955 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 FAM102AQ5T9C2 384 aaPredicted RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 PATL1Q86TB9 770 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 RAPGEF5Q92565 580 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 SAAL1Q96ER3 474 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 RNPC3Q96LT9 517 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 AGO2Q9UKV8 859 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 SNX12Q9UMY4 172 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 TRAF3IP3Q9Y228 551 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 MROH2AA6NES4 1674 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 PNPLA6Q8IY17 1366 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 ASB14A6NK59 587 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 HSPA1AP0DMV8 641 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 HSPA1BP0DMV9 641 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 PTPN21Q16825 1174 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 FASTKD5Q7L8L6 764 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 MAP3K14Q99558 947 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 C11orf70Q9BRQ4 267 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 FAM49AQ9H0Q0 323 aaPredicted RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 CDV3Q9UKY7 258 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 RIMS1Q86UR5 1692 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 SSU72P8A0A1W2PR75 194 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 SYF2O95926 243 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 APOA4P06727 396 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 YWHABP31946 246 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 BYSLQ13895 437 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 PTK2BQ14289 1009 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 PPM1NQ8N819 430 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 SPATA33Q96N06 139 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 MED15Q96RN5 788 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 FRMD8P1Q9BZ68 369 aaPredicted RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 TRABDQ9H4I3 376 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 SPATA31A3Q5VYP0 1347 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 USP17L10C9JJH3 530 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 KITP10721 976 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 BRAFP15056 766 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 HSD17B4P51659 736 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 HIC1Q14526 733 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 ZNF677Q86XU0 584 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 RHPN2Q8IUC4 686 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 GANCQ8TET4 914 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 MPP6Q9NZW5 540 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 GABBR1Q9UBS5 961 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 PRR36Q9H6K5 1346 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 CYP2D6P10635 497 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 PRAMEP78395 509 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 CNGA3Q16281 694 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 ZBTB41Q5SVQ8 909 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 MFSD14CQ5VZR4 134 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 TRAPPC11Q7Z392 1133 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 OXER1Q8TDS5 423 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 FAM161BQ96MY7 647 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 RNF146Q9NTX7 359 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 PKD2L2Q9NZM6 624 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 EHD2Q9NZN4 543 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 FBXL5Q9UKA1 691 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 TTC26A0AVF1 554 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 ANGPT2O15123 496 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 FCER1AP12319 257 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 CDC27P30260 824 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 HNRNPH2P55795 449 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 CENPCQ03188 943 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 GRIN1Q05586 938 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms