RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 TADA2AO75478 443 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 THP07101 528 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 AKAP5P24588 427 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 FOSBP53539 338 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 ST3GAL1Q11201 340 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 LILRA6Q6PI73 481 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 TAS1R1Q7RTX1 841 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 IFT74Q96LB3 600 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 RTP3Q9BQQ7 232 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 APOL6Q9BWW8 343 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 GPR62Q9BZJ7 368 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 CCDC113Q9H0I3 377 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 MFSD1Q9H3U5 465 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 KCNK12Q9HB15 430 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 KCNG1Q9UIX4 513 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 KIF3AQ9Y496 699 aa15.03■□□□□ -0
TRIM28-211ENST00000597968 TMEM189-UBE2V1I3L0A0 370 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 TGM5O43548 720 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 PRKCBP05771 671 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 ASGR2P07307 311 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 POU2F2P09086 479 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 U2AF2P26368 475 aaKnown RBP eCLIP15.02■□□□□ -0
TRIM28-211ENST00000597968 HOXA9P31269 272 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 GNL2Q13823 731 aaKnown RBP15.02■□□□□ -0
TRIM28-211ENST00000597968 TTC38Q5R3I4 469 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 KANK3Q6NY19 840 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 FAM184AQ8NB25 1140 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 DEPTORQ8TB45 409 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 PIK3R5Q8WYR1 880 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 PRKD2Q9BZL6 878 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 NT5C3AQ9H0P0 336 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 PDZD7Q9H5P4 517 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 C17orf75Q9HAS0 396 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 GPRC5CQ9NQ84 441 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 WNT16Q9UBV4 365 aa15.02■□□□□ -0
TRIM28-211ENST00000597968 ZDBF2Q9HCK1 2354 aa15.02□□□□□ -0.01
TRIM28-211ENST00000597968 HNRNPA1P09651 372 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRIM28-211ENST00000597968 TMEM132AQ24JP5 1023 aa15.01□□□□□ -0.01
TRIM28-211ENST00000597968 UVSSAQ2YD98 709 aa15.01□□□□□ -0.01
TRIM28-211ENST00000597968 POTEGQ6S5H5 508 aa15.01□□□□□ -0.01
TRIM28-211ENST00000597968 CCDC83Q8IWF9 413 aa15.01□□□□□ -0.01
TRIM28-211ENST00000597968 IGSF22Q8N9C0 903 aa15.01□□□□□ -0.01
TRIM28-211ENST00000597968 RIN2Q8WYP3 895 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-211ENST00000597968 SMG7Q92540 1137 aaKnown RBP15.01□□□□□ -0.01
TRIM28-211ENST00000597968 ATOH1Q92858 354 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-211ENST00000597968 ZNF707Q96C28 371 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-211ENST00000597968 UROC1Q96N76 676 aa15.01□□□□□ -0.01
TRIM28-211ENST00000597968 TTPALQ9BTX7 342 aa15.01□□□□□ -0.01
TRIM28-211ENST00000597968 TIPINQ9BVW5 301 aa15.01□□□□□ -0.01
TRIM28-211ENST00000597968 LRWD1Q9UFC0 647 aa15.01□□□□□ -0.01
TRIM28-211ENST00000597968 MYO15AQ9UKN7 3530 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 TDRD15B5MCY1 1934 aaKnown RBP15□□□□□ -0.01
TRIM28-211ENST00000597968 ZMYND10O75800 440 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 PDGFBP01127 241 aaPredicted RBP15□□□□□ -0.01
TRIM28-211ENST00000597968 AOC1P19801 751 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 PRPHP41219 470 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 NBL1P41271 181 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 ZNF174Q15697 407 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 NAB2Q15742 525 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 MAEAQ7L5Y9 396 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 C4orf32Q8N8J7 132 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 TMEM105Q8N8V8 129 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 PIDD1Q9HB75 910 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 SNTG2Q9NY99 539 aa15□□□□□ -0.01
TRIM28-211ENST00000597968 RBM19Q9Y4C8 960 aaKnown RBP15□□□□□ -0.01
TRIM28-211ENST00000597968 PTGESO14684 152 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 TRAPPC3O43617 180 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 RFPL2O75678 378 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 RECQL4O94761 1208 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 GBP2P32456 591 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-211ENST00000597968 CCT6AP40227 531 aaKnown RBP14.99□□□□□ -0.01
TRIM28-211ENST00000597968 GUCY1B3Q02153 619 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-211ENST00000597968 CDR2LQ86X02 465 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-211ENST00000597968 LNX1Q8TBB1 728 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-211ENST00000597968 BHMT2Q9H2M3 363 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 TMEM134Q9H6X4 195 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 TOPORSQ9NS56 1045 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-211ENST00000597968 KLK14Q9P0G3 267 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 FBXW11Q9UKB1 542 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 DNM3Q9UQ16 869 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 TNFSF13BQ9Y275 285 aa14.99□□□□□ -0.01
TRIM28-211ENST00000597968 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-211ENST00000597968 F8W810 466 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 K7ERI5 159 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 N4BP1O75113 896 aaKnown RBP14.98□□□□□ -0.01
TRIM28-211ENST00000597968 SRFP11831 508 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 LAMP2P13473 410 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 PSMD5Q16401 504 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 RTP2Q5QGT7 225 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 LIN9Q5TKA1 542 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 ATF7IP2Q5U623 682 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 FAM171A1Q5VUB5 890 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 KRT79Q5XKE5 535 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 DCLRE1AQ6PJP8 1040 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 PALB2Q86YC2 1186 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 BSNDQ8WZ55 320 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 DRC1Q96MC2 740 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 SLC38A7Q9NVC3 462 aa14.98□□□□□ -0.01
TRIM28-211ENST00000597968 FBXL21Q9UKT6 434 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms