RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SEC14L1Q92503 715 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 C1orf112Q9NSG2 853 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 GTF3C4Q9UKN8 822 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 STYXL1Q9Y6J8 313 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 LCTP09848 1927 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 FAM187AA6NFU0 413 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 SHOX2O60902 331 aaPredicted RBP20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 LDHAP00338 332 aaKnown RBP20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 MMEP08473 750 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 NAMPTP43490 491 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 BPIFB4P59827 614 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 PSMD6Q15008 389 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 DCAF12L1Q5VU92 463 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 CYFIP1Q7L576 1253 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 TAS1R3Q7RTX0 852 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 FNBP1Q96RU3 617 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 ZSWIM1Q9BR11 485 aa20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 NIFKQ9BYG3 293 aaKnown RBP20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 TOPORSQ9NS56 1045 aaPredicted RBP20.6■□□□□ 0.89
PRKCSH-209ENST00000589838 USP2O75604 605 aaPredicted RBP20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 RFC5P40937 340 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 CLDN10P78369 228 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 DHX34Q14147 1143 aaKnown RBP20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 MESDQ14696 234 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 TRADDQ15628 312 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 SEL1L2Q5TEA6 688 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 ACAD10Q6JQN1 1059 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 DEPTORQ8TB45 409 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 DHX38Q92620 1227 aaKnown RBP20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 PORCNQ9H237 461 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 NRBP2Q9NSY0 501 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 RASAL2Q9UJF2 1139 aa20.59■□□□□ 0.89
PRKCSH-209ENST00000589838 TTI1O43156 1089 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 ERLIN2O94905 339 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 PIGRP01833 764 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 POU5F1Q01860 360 aaKnown RBP20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 SP2Q02086 613 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 LBX2Q6XYB7 198 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 C15orf39Q6ZRI6 1047 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 ZNF677Q86XU0 584 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 RIOX2Q8IUF8 465 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 ZNF564Q8TBZ8 553 aaPredicted RBP20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 PSPC1Q8WXF1 523 aaKnown RBP20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 SLC7A3Q8WY07 619 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 ZNF653Q96CK0 615 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 NUP85Q9BW27 656 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 DHX33Q9H6R0 707 aaKnown RBP20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.58■□□□□ 0.896e-7■■■■□ 25
PRKCSH-209ENST00000589838 SSC5DA1L4H1 1573 aa20.58■□□□□ 0.89
PRKCSH-209ENST00000589838 GOLGA6L10A6NI86 522 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 TMEM110-MUSTN1A8MSY1 372 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 K7ERI5 159 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 COMTP21964 271 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 ECHS1P30084 290 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 ALDH5A1P51649 535 aaPredicted RBP20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 DR1Q01658 176 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 EFCAB13Q8IY85 973 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 PIK3R5Q8WYR1 880 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 ALG3Q92685 438 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 TATDN2Q93075 761 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 ARL8AQ96BM9 186 aa20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 AGO2Q9UKV8 859 aaKnown RBP20.58■□□□□ 0.88
PRKCSH-209ENST00000589838 KRT5P13647 590 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 CTNNA2P26232 953 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 ARL2P36404 184 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 SKOR1P84550 965 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 TTMPQ5BVD1 217 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 FAM160B1Q5W0V3 765 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 LRRC31Q6UY01 552 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 SEPT14Q6ZU15 432 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 DDX1Q92499 740 aaKnown RBP20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 TRIM11Q96F44 468 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 RUNDC3BQ96NL0 473 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 SGIP1Q9BQI5 828 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 CAPS2Q9BXY5 557 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 TRPC6Q9Y210 931 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 PLAAQ9Y263 795 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 TELO2Q9Y4R8 837 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 PPME1Q9Y570 386 aa20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 DICER1Q9UPY3 1922 aaKnown RBP20.57■□□□□ 0.88
PRKCSH-209ENST00000589838 IGKV6D-21A0A0A0MT36 114 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 DAPK3O43293 454 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 SORBS3O60504 671 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 TNNI1P19237 187 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 ATP4AP20648 1035 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 CHRNA3P32297 505 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 HIRAP54198 1017 aaPredicted RBP20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 CNTN2Q02246 1040 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 NEDD9Q14511 834 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 CLEC16AQ2KHT3 1053 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 DDX42Q86XP3 938 aaKnown RBP eCLIP20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 PLVAPQ9BX97 442 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 TMEM134Q9H6X4 195 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 CSADQ9Y600 493 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 SNCAIPQ9Y6H5 919 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 POLR2AP24928 1970 aaKnown RBP20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 SIP14410 1827 aa20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 HMGB1P1B2RPK0 211 aaPredicted RBP20.56■□□□□ 0.88
PRKCSH-209ENST00000589838 SPOPO43791 374 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms