RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 GHRP10912 638 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 SCG2P13521 617 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 MRPS25P82663 173 aaKnown RBP6.07□□□□□ -1.44
LINC01538-201ENST00000588074 WDR43Q15061 677 aaKnown RBP eCLIP6.07□□□□□ -1.44
LINC01538-201ENST00000588074 SHROOM1Q2M3G4 852 aaPredicted RBP6.07□□□□□ -1.44
LINC01538-201ENST00000588074 GPATCH4Q5T3I0 446 aaKnown RBP6.07□□□□□ -1.44
LINC01538-201ENST00000588074 FIP1L1Q6UN15 594 aaKnown RBP6.07□□□□□ -1.44
LINC01538-201ENST00000588074 C6orf89Q6UWU4 347 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 OVCH2Q7RTZ1 564 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 ITPRIPQ8IWB1 547 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 MYCT1Q8N699 235 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 STKLD1Q8NE28 680 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 CASP10Q92851 521 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 ASIC4Q96FT7 647 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 CLMNQ96JQ2 1002 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 MRGPRX3Q96LB0 322 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 TEKT5Q96M29 485 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 CCDC138Q96M89 665 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 CATSPER2Q96P56 530 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 SLC30A3Q99726 388 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.07□□□□□ -1.44
LINC01538-201ENST00000588074 TIMMDC1Q9NPL8 285 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 C1orf112Q9NSG2 853 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 COQ6Q9Y2Z9 468 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 CSADQ9Y600 493 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 TTC21BQ7Z4L5 1316 aa6.07□□□□□ -1.44
LINC01538-201ENST00000588074 PRG4Q92954 1404 aaPredicted RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 PRAMEF27A3QJZ7 478 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 DCDC2CA8MYV0 355 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 WNT7AO00755 349 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 EFCAB14O75071 495 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 UBOX5O94941 541 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 GSTP1P09211 210 aaKnown RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 BTF3P20290 206 aaKnown RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ACADSBP45954 432 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 POLE2P56282 527 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 SCAND1P57086 179 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 GNGT1P63211 74 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ADAM9Q13443 819 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 DPYSQ14117 519 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 LRRC32Q14392 662 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 C10orf76Q5T2E6 689 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 SLC6A19Q695T7 634 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 KCNT2Q6UVM3 1135 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ZGPATQ8N5A5 531 aaKnown RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 CNBD1Q8NA66 436 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 SLC16A10Q8TF71 515 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 SDCCAG3Q96C92 435 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 CEP295NLQ96MC4 621 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 XPO4Q9C0E2 1151 aaKnown RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 WDR12Q9GZL7 423 aaKnown RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 MIS12Q9H081 205 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ZBTB40Q9NUA8 1239 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 PCDHA8Q9Y5H6 950 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ERCC6L2Q5T890 1561 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 POLR3AO14802 1390 aaPredicted RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 FHOD3Q2V2M9 1422 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 GOLGA8KD6RF30 607 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 SPECC1L-ADORA2AF8WAN1 911 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 EFSO43281 561 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 PQBP1O60828 265 aaKnown RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ZNF254O75437 659 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 BAG3O95817 575 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ESRRAP11474 423 aaPredicted RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ALADP13716 330 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ATP2A2P16615 1042 aaKnown RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 CD9P21926 228 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ATP5DP30049 168 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 RXRGP48443 463 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 PDE6CP51160 858 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ZNF143P52747 638 aaPredicted RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ELF3P78545 371 aaPredicted RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 CYP4A11Q02928 519 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 SPCS2Q15005 226 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 NCAPH2Q6IBW4 605 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 TRIM65Q6PJ69 517 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 CRACR2BQ8N4Y2 399 aaPredicted RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 BVESQ8NE79 360 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 ZNF75CPQ92670 426 aaPredicted RBP6.06□□□□□ -1.44
LINC01538-201ENST00000588074 AZIN2Q96A70 460 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 PGBD4Q96DM1 585 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 CCDC28BQ9BUN5 200 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 VPS33BQ9H267 617 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 PIDD1Q9HB75 910 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 VPS45Q9NRW7 570 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 NDUFA13Q9P0J0 144 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 CCPG1Q9ULG6 757 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 SOX13Q9UN79 622 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 WASF2Q9Y6W5 498 aa6.06□□□□□ -1.44
LINC01538-201ENST00000588074 KIAA0586Q9BVV6 1533 aa6.05□□□□□ -1.44
LINC01538-201ENST00000588074 KDM5DQ9BY66 1539 aa6.05□□□□□ -1.44
LINC01538-201ENST00000588074 KDM5CP41229 1560 aa6.05□□□□□ -1.44
LINC01538-201ENST00000588074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.05□□□□□ -1.44
LINC01538-201ENST00000588074 LCHNA4D1U4 455 aa6.05□□□□□ -1.44
LINC01538-201ENST00000588074 H0YC42 278 aa6.05□□□□□ -1.44
LINC01538-201ENST00000588074 EYA2O00167 538 aa6.05□□□□□ -1.44
LINC01538-201ENST00000588074 TNFRSF10AO00220 468 aa6.05□□□□□ -1.44
LINC01538-201ENST00000588074 SPINT1O43278 529 aa6.05□□□□□ -1.44
LINC01538-201ENST00000588074 EIF2S1P05198 315 aaKnown RBP6.05□□□□□ -1.44
LINC01538-201ENST00000588074 HOXD8P13378 290 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms