RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 FAAP100Q0VG06 881 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 IFI16Q16666 785 aaKnown RBP5.81□□□□□ -1.48
VAPA-203ENST00000577539 ASTE1Q2TB18 679 aaPredicted RBP5.81□□□□□ -1.48
VAPA-203ENST00000577539 EMBQ6PCB8 327 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 LRRC31Q6UY01 552 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 ZNF571Q7Z3V5 609 aaPredicted RBP5.81□□□□□ -1.48
VAPA-203ENST00000577539 FAM178BQ8IXR5 827 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 FAM186BQ8IYM0 893 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 SYT2Q8N9I0 419 aaPredicted RBP5.81□□□□□ -1.48
VAPA-203ENST00000577539 ACER1Q8TDN7 264 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 AENQ8WTP8 325 aaKnown RBP5.81□□□□□ -1.48
VAPA-203ENST00000577539 ARL8AQ96BM9 186 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 FAM20AQ96MK3 541 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 NT5C1AQ9BXI3 368 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 FAM107BQ9H098 131 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 EHD4Q9H223 541 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 CRISPLD1Q9H336 500 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 CHST12Q9NRB3 414 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 CACNA2D2Q9NY47 1150 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 SNTG2Q9NY99 539 aa5.81□□□□□ -1.48
VAPA-203ENST00000577539 G3BP2Q9UN86 482 aaKnown RBP5.81□□□□□ -1.48
VAPA-203ENST00000577539 PITPNM2Q9BZ72 1349 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 FAM221AA4D161 298 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 GRID2IPA4D2P6 1211 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 PPIP5K2O43314 1243 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 EXOC3O60645 756 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 LCA5LO95447 670 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 KRT14P02533 472 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 TRIM49P0CI25 452 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 TRIM49CP0CI26 452 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 PON1P27169 355 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 STAT1P42224 750 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 CCT5P48643 541 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 AARSP49588 968 aaKnown RBP eCLIP5.8□□□□□ -1.48
VAPA-203ENST00000577539 PPFIA1Q13136 1202 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 TRADDQ15628 312 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 ODR4Q5SWX8 454 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 HYIQ5T013 277 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 FRMD5Q7Z6J6 570 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 DAAM2Q86T65 1068 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 ETNPPLQ8TBG4 499 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 SYN2Q92777 582 aaPredicted RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 PRMT6Q96LA8 375 aaPredicted RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 TMEM74Q96NL1 305 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 GANQ9H2C0 597 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 TYW1Q9NV66 732 aaKnown RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 NDFIP2Q9NV92 336 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 PCDHA2Q9Y5H9 948 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 WNK3Q9BYP7 1800 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 MYO3BQ8WXR4 1341 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 BTAF1O14981 1849 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 SHTN1A0MZ66 631 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 GOLGA6L10A6NI86 522 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 TMEM110-MUSTN1A8MSY1 372 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 GCOM1H8Y6P7 765 aaPredicted RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 AGPSO00116 658 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 MEN1O00255 615 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 PDXKO00764 312 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 TM4SF5O14894 197 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 LRRN2O75325 713 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 FAM153BP0C7A2 387 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 POLR2MP0CAP2 368 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 HOXA7P31268 230 aaPredicted RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 HPDP32754 393 aaPredicted RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 STAT2P52630 851 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 FAM153CQ494X1 144 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 STRIP1Q5VSL9 837 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 MIGA2Q7L4E1 593 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 SIAH1Q8IUQ4 282 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 CDAN1Q8IWY9 1227 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 MSL3Q8N5Y2 521 aaKnown RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 BCAS4Q8TDM0 211 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 SH2D3AQ9BRG2 576 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 CAPS2Q9BXY5 557 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 DDX47Q9H0S4 455 aaKnown RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 RASSF4Q9H2L5 321 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 FAM153AQ9UHL3 310 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 TCEAL9Q9UHQ7 104 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 FRMD4BQ9Y2L6 1034 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 MYH1P12882 1939 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 A0A1W2PRG0 241 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 ARHGEF35A5YM69 484 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 KRIT1O00522 736 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 RAD51CO43502 376 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 EYA4O95677 639 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 TFE3P19532 575 aaPredicted RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 SREBF1P36956 1147 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 GRIA4P48058 902 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 JAG1P78504 1218 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 PDCLQ13371 301 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 COG2Q14746 738 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 DACT2Q5SW24 774 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 RINT1Q6NUQ1 792 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 SRLQ86TD4 932 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 ZNF598Q86UK7 904 aaKnown RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 DDX42Q86XP3 938 aaKnown RBP eCLIP5.8□□□□□ -1.48
VAPA-203ENST00000577539 CPXCR1Q8N123 301 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 SNIP1Q8TAD8 396 aaKnown RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 ZIM3Q96PE6 472 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 HHIPQ96QV1 700 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms