RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ZBTB39O15060 712 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 SLITRK3O94933 977 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 BAG4O95429 457 aaKnown RBP13.2□□□□□ -0.3
ACTN1-221ENST00000556571 PRKCQQ04759 706 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 SNW1Q13573 536 aaKnown RBP13.2□□□□□ -0.3
ACTN1-221ENST00000556571 TOB2Q14106 344 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-221ENST00000556571 CTTNQ14247 550 aaKnown RBP13.2□□□□□ -0.3
ACTN1-221ENST00000556571 HSP90AA2PQ14568 343 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-221ENST00000556571 LIN9Q5TKA1 542 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 SLC27A1Q6PCB7 646 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 MTSS1LQ765P7 747 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 RUFY3Q7L099 469 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 TPH2Q8IWU9 490 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 SLFN12Q8IYM2 578 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 MAML2Q8IZL2 1156 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-221ENST00000556571 ST13P5Q8NFI4 369 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-221ENST00000556571 FGF14Q92915 247 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 AIFM3Q96NN9 605 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 TTPALQ9BTX7 342 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 DDX23Q9BUQ8 820 aaKnown RBP13.2□□□□□ -0.3
ACTN1-221ENST00000556571 NFKBIZQ9BYH8 718 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 OSBPL6Q9BZF3 934 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 PARP2Q9UGN5 583 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 FBXW11Q9UKB1 542 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 FBXO4Q9UKT5 387 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 ACACBO00763 2458 aa13.2□□□□□ -0.3
ACTN1-221ENST00000556571 A0A1B0GUA9 196 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 SPTLC1O15269 473 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 LAMTOR5O43504 91 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 XYLBO75191 536 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 LRRN2O75325 713 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 DGAT1O75907 488 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 LYPLA2O95372 231 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 NPTXRO95502 500 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 HOXA9P31269 272 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 ARL2P36404 184 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 PFKPQ01813 784 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 CYP4A11Q02928 519 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 CAPSQ13938 189 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 MLF2Q15773 248 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-221ENST00000556571 SLC44A4Q53GD3 710 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 RTP2Q5QGT7 225 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 PPM1LQ5SGD2 360 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 PRSS55Q6UWB4 352 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-221ENST00000556571 RSPO2Q6UXX9 243 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-221ENST00000556571 GPR161Q8N6U8 529 aaKnown RBP13.19□□□□□ -0.3
ACTN1-221ENST00000556571 ASAP3Q8TDY4 903 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 PIK3R5Q8WYR1 880 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 RABGGTAQ92696 567 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 FGF13Q92913 245 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 PHF20Q9BVI0 1012 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
ACTN1-221ENST00000556571 SPATA6Q9NWH7 488 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-221ENST00000556571 MTCL1Q9Y4B5 1905 aaKnown RBP13.18□□□□□ -0.3
ACTN1-221ENST00000556571 FAM170BA6NMN3 283 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 B4GALT5O43286 388 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 REC8O95072 547 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 C8AP07357 584 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 XBP1P17861 261 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 SDHBP21912 280 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 MAGEA9P43362 315 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 NTHL1P78549 312 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 ELAVL2Q12926 359 aaKnown RBP13.18□□□□□ -0.3
ACTN1-221ENST00000556571 TUSC3Q13454 348 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 RSPO4Q2I0M5 234 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-221ENST00000556571 VARS2Q5ST30 1063 aaKnown RBP13.18□□□□□ -0.3
ACTN1-221ENST00000556571 FAM171A1Q5VUB5 890 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 PDXDC1Q6P996 788 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 PIK3AP1Q6ZUJ8 805 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 POTEDQ86YR6 584 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 LNX1Q8TBB1 728 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-221ENST00000556571 ATRIPQ8WXE1 791 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 HSD17B14Q9BPX1 270 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 ANKEF1Q9NU02 776 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 KLK14Q9P0G3 267 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 PCDHGA2Q9Y5H1 932 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 CYP46A1Q9Y6A2 500 aa13.18□□□□□ -0.3
ACTN1-221ENST00000556571 CDKL5O76039 1030 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 POU2F2P09086 479 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 GLRA2P23416 452 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 CSTF1Q05048 431 aaKnown RBP13.17□□□□□ -0.3
ACTN1-221ENST00000556571 STK3Q13188 491 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 UBXN2BQ14CS0 331 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 PSMD5Q16401 504 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 UVSSAQ2YD98 709 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 CDR2LQ86X02 465 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-221ENST00000556571 CEP57Q86XR8 500 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
ACTN1-221ENST00000556571 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 CCDC43Q96MW1 224 aaKnown RBP13.17□□□□□ -0.3
ACTN1-221ENST00000556571 NELL2Q99435 816 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 EIF2AK1Q9BQI3 630 aaKnown RBP13.17□□□□□ -0.3
ACTN1-221ENST00000556571 PAAF1Q9BRP4 392 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 NCDNQ9UBB6 729 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 POLIQ9UNA4 740 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms