RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
C11orf54-214ENST00000540113 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
C11orf54-214ENST00000540113 SENP7Q9BQF6 1050 aa12.39□□□□□ -0.43
C11orf54-214ENST00000540113 TRIM7Q9C029 511 aa12.39□□□□□ -0.43
C11orf54-214ENST00000540113 CNOT8Q9UFF9 292 aaKnown RBP12.39□□□□□ -0.43
C11orf54-214ENST00000540113 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
C11orf54-214ENST00000540113 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
C11orf54-214ENST00000540113 DAAM1Q9Y4D1 1078 aa12.39□□□□□ -0.43
C11orf54-214ENST00000540113 FAM169AQ9Y6X4 670 aa12.39□□□□□ -0.43
C11orf54-214ENST00000540113 ZNFX1Q9P2E3 1918 aaKnown RBP12.39□□□□□ -0.43
C11orf54-214ENST00000540113 SMIM23A6NLE4 172 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 EBAG9O00559 213 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 KRT5P13647 590 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 CYP11B1P15538 503 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 OAZ1P54368 228 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 WNT7BP56706 349 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 CORO7P57737 925 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 DMP1Q13316 513 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-214ENST00000540113 ODF2Q5BJF6 829 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 NLRX1Q86UT6 975 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 PRELID2Q8N945 189 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 ZSWIM1Q9BR11 485 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 FAM213AQ9BRX8 229 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 A1CFQ9NQ94 594 aaKnown RBP12.38□□□□□ -0.43
C11orf54-214ENST00000540113 TTC7AQ9ULT0 858 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-214ENST00000540113 PCDHA10Q9Y5I2 948 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 HMGB1P1B2RPK0 211 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-214ENST00000540113 MAPK13O15264 365 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 RFX1P22670 979 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 MDH1P40925 334 aaKnown RBP12.38□□□□□ -0.43
C11orf54-214ENST00000540113 SMTNP53814 917 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 MFAP3P55082 362 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 DUPD1Q68J44 220 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 KRT39Q6A163 491 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 CATSPERGQ6ZRH7 1159 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 APOBEC3FQ8IUX4 373 aaKnown RBP12.38□□□□□ -0.43
C11orf54-214ENST00000540113 MAP4K3Q8IVH8 894 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 RDM1Q8NG50 284 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 ZNF564Q8TBZ8 553 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-214ENST00000540113 MAGOHBQ96A72 148 aaKnown RBP12.38□□□□□ -0.43
C11orf54-214ENST00000540113 KLRG1Q96E93 195 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 BICD1Q96G01 975 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 FMO2Q99518 471 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 ERP44Q9BS26 406 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 FAM114A2Q9NRY5 505 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 TMEM51Q9NW97 253 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 CYP39A1Q9NYL5 469 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 GGA3Q9NZ52 723 aa12.38□□□□□ -0.43
C11orf54-214ENST00000540113 SEPT9Q9UHD8 586 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-214ENST00000540113 GOLGA6L10A0A0M3HER8 536 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 E7EVH7 732 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 HNRNPDLO14979 420 aaKnown RBP12.37□□□□□ -0.43
C11orf54-214ENST00000540113 P4HA2O15460 535 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 SPOPO43791 374 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 LIG3P49916 1009 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 PEX5P50542 639 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-214ENST00000540113 MCCD1P59942 119 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-214ENST00000540113 PRKG1Q13976 671 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 PTGISQ16647 500 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 KRT71Q3SY84 523 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 LRIG3Q6UXM1 1119 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 SV2AQ7L0J3 742 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 CCDC60Q8IWA6 550 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-214ENST00000540113 UBL4BQ8N7F7 174 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 FBXO25Q8TCJ0 367 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 NSUN6Q8TEA1 469 aaKnown RBP12.37□□□□□ -0.43
C11orf54-214ENST00000540113 SEC14L1Q92503 715 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 SHC3Q92529 594 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 XPNPEP1Q9NQW7 623 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 ZDHHC18Q9NUE0 388 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 RAB20Q9NX57 234 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 POLR2AP24928 1970 aaKnown RBP12.37□□□□□ -0.43
C11orf54-214ENST00000540113 SPDYE16A6NNV3 312 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-214ENST00000540113 ATP2A1O14983 1001 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 PTGIRP43119 386 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 MAGOHP61326 146 aaKnown RBP12.37□□□□□ -0.43
C11orf54-214ENST00000540113 FSTL1Q12841 308 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 MTERF2Q49AM1 385 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 SPOPLQ6IQ16 392 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 C11orf63Q6NUN7 778 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 ZDHHC24Q6UX98 284 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 TAS1R3Q7RTX0 852 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 ZNF516Q92618 1163 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 PTPRFP10586 1907 aa12.37□□□□□ -0.43
C11orf54-214ENST00000540113 TLDC2A0PJX2 215 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 C19orf81C9J6K1 198 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 KIAA0391O15091 583 aaKnown RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 CLSTN1O94985 981 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 RPL21P46778 160 aaKnown RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 SNRPFP62306 86 aaKnown RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 CYP24A1Q07973 514 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 IFFO1Q0D2I5 559 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 SF3A3Q12874 501 aaKnown RBP eCLIP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 SNX1Q13596 522 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 DLK2Q6UY11 383 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 EIF1ADQ8N9N8 165 aaKnown RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 FBXL13Q8NEE6 735 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms