RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 NECTIN4Q96NY8 510 aa12.59□□□□□ -0.39
CPNE7-206ENST00000532500 CCDC113Q9H0I3 377 aa12.59□□□□□ -0.39
CPNE7-206ENST00000532500 C2orf40Q9H1Z8 148 aa12.59□□□□□ -0.39
CPNE7-206ENST00000532500 FZD8Q9H461 694 aa12.59□□□□□ -0.39
CPNE7-206ENST00000532500 SFXN1Q9H9B4 322 aa12.59□□□□□ -0.39
CPNE7-206ENST00000532500 NOTCH4Q99466 2003 aa12.59□□□□□ -0.39
CPNE7-206ENST00000532500 MIA3Q5JRA6 1907 aa12.58□□□□□ -0.39
CPNE7-206ENST00000532500 CARNS1A5YM72 827 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 PTGESO14684 152 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 ST18O60284 1047 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 HIP1RO75146 1068 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 KIF4AO95239 1232 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 GLUD1P00367 558 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 ADH1AP07327 375 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 HARSP12081 509 aaKnown RBP12.58□□□□□ -0.4
CPNE7-206ENST00000532500 IGFBP6P24592 240 aaPredicted RBP12.58□□□□□ -0.4
CPNE7-206ENST00000532500 U2AF2P26368 475 aaKnown RBP eCLIP12.58□□□□□ -0.4
CPNE7-206ENST00000532500 GJB2P29033 226 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 NAMPTP43490 491 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 PEX3P56589 373 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 ORC2Q13416 577 aaPredicted RBP12.58□□□□□ -0.4
CPNE7-206ENST00000532500 HSP90AA2PQ14568 343 aaPredicted RBP12.58□□□□□ -0.4
CPNE7-206ENST00000532500 RABEP1Q15276 862 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 NT5DC1Q5TFE4 455 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 KIAA0319Q5VV43 1072 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 KCNK18Q7Z418 384 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 FBXL6Q8N531 539 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 PRSS33Q8NF86 280 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 TMX3Q96JJ7 454 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 PHOX2BQ99453 314 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 ADPGKQ9BRR6 497 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 RUSC1Q9BVN2 902 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 ADAM28Q9UKQ2 775 aa12.58□□□□□ -0.4
CPNE7-206ENST00000532500 CCDC195A0A1B0GUA6 201 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 SFI1A8K8P3 1242 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 H3BQV1 296 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 ACKR2O00590 384 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 INPPL1O15357 1258 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 TRAPPC10P48553 1259 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 NHLH1Q02575 133 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 TUSC3Q13454 348 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 MTMR3Q13615 1198 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 PPP2R5AQ15172 486 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 FAM187BQ17R55 369 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 RTP2Q5QGT7 225 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 ATF7IP2Q5U623 682 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 KRT79Q5XKE5 535 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 DTHD1Q6ZMT9 781 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 CCDC149Q6ZUS6 474 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 GPR149Q86SP6 731 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 CEP120Q8N960 986 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 ASIC4Q96FT7 647 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 GOLGA2P5Q9HBQ8 144 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 FAM86C1Q9NVL1 165 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 SORCS3Q9UPU3 1222 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 USP34Q70CQ2 3546 aa12.57□□□□□ -0.4
CPNE7-206ENST00000532500 ZFHX2Q9C0A1 2572 aaPredicted RBP12.56□□□□□ -0.4
CPNE7-206ENST00000532500 NPHP3-ACAD11A0A0J9YXS1 232 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 VWA3AA6NCI4 1184 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 I3L4J1 428 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 K7ERI5 159 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 SLC16A4O15374 487 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 THP07101 528 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 HOXD11P31277 338 aaPredicted RBP12.56□□□□□ -0.4
CPNE7-206ENST00000532500 GBP2P32456 591 aaPredicted RBP12.56□□□□□ -0.4
CPNE7-206ENST00000532500 DSG1Q02413 1049 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
CPNE7-206ENST00000532500 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
CPNE7-206ENST00000532500 USP41Q3LFD5 358 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 IGSF22Q8N9C0 903 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 RSAD2Q8WXG1 361 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 SMG7Q92540 1137 aaKnown RBP12.56□□□□□ -0.4
CPNE7-206ENST00000532500 KIFAP3Q92845 792 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 MMTAG2Q9BU76 263 aaKnown RBP12.56□□□□□ -0.4
CPNE7-206ENST00000532500 RAB34Q9BZG1 259 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 PIDD1Q9HB75 910 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
CPNE7-206ENST00000532500 DNM3Q9UQ16 869 aa12.56□□□□□ -0.4
CPNE7-206ENST00000532500 COL4A3Q01955 1670 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 ADAM12O43184 909 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 TGM5O43548 720 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 N4BP1O75113 896 aaKnown RBP12.55□□□□□ -0.4
CPNE7-206ENST00000532500 EFEMP2O95967 443 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 NPTX2P47972 431 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 PDIA5Q14554 519 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 PSMD5Q16401 504 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 ZNF568Q3ZCX4 644 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 SEZ6Q53EL9 994 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 GET4Q7L5D6 327 aaPredicted RBP12.55□□□□□ -0.4
CPNE7-206ENST00000532500 RNF168Q8IYW5 571 aaPredicted RBP12.55□□□□□ -0.4
CPNE7-206ENST00000532500 DAW1Q8N136 415 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 TMEM130Q8N3G9 435 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 ACSF2Q96CM8 615 aaPredicted RBP12.55□□□□□ -0.4
CPNE7-206ENST00000532500 TARS2Q9BW92 718 aaKnown RBP12.55□□□□□ -0.4
CPNE7-206ENST00000532500 UPF2Q9HAU5 1272 aaKnown RBP12.55□□□□□ -0.4
CPNE7-206ENST00000532500 RXFP1Q9HBX9 757 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms