RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 POMGNT1Q8WZA1 660 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 IWS1Q96ST2 819 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 TMEM117Q9H0C3 514 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 ADGRA3Q8IWK6 1321 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 MAFGO15525 162 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 MGRN1O60291 552 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 CEP104O60308 925 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 SLMAPQ14BN4 828 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 LACTB2Q53H82 288 aaPredicted RBP12.43□□□□□ -0.42
USP35-207ENST00000530546 DAAM2Q86T65 1068 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 NCAPG2Q86XI2 1143 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 IQCKQ8N0W5 287 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 PPM1KQ8N3J5 372 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 SH2D3CQ8N5H7 860 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 RDM1Q8NG50 284 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 CYFIP2Q96F07 1278 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 TIPINQ9BVW5 301 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 ACP6Q9NPH0 428 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 HOMER3Q9NSC5 361 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
USP35-207ENST00000530546 PFASO15067 1338 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 STBD1O95210 358 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 KIF4AO95239 1232 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 DLATP10515 647 aaKnown RBP12.42□□□□□ -0.42
USP35-207ENST00000530546 GCKP35557 465 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 IFI16Q16666 785 aaKnown RBP12.42□□□□□ -0.42
USP35-207ENST00000530546 ANKRD20A8PQ5CZ79 823 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 CFAP58Q5T655 872 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 MOB2Q70IA6 237 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 PEX26Q7Z412 305 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 KLHL7Q8IXQ5 586 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 KRT12Q99456 494 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 POLR3FQ9H1D9 316 aaPredicted RBP12.42□□□□□ -0.42
USP35-207ENST00000530546 ELP3Q9H9T3 547 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 XPNPEP1Q9NQW7 623 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 BTBD7Q9P203 1132 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 PHIPQ8WWQ0 1821 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 IGSF9BQ9UPX0 1349 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 SPATA31C2B4DYI2 1134 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 HNRNPDLO14979 420 aaKnown RBP12.42□□□□□ -0.42
USP35-207ENST00000530546 STXBP2Q15833 593 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 MIS18BP1Q6P0N0 1132 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 ABHD15Q6UXT9 468 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 C12orf56Q8IXR9 622 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 PROCA1Q8NCQ7 364 aaPredicted RBP12.42□□□□□ -0.42
USP35-207ENST00000530546 SLC30A5Q8TAD4 765 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 OLIG1Q8TAK6 271 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 KIFAP3Q92845 792 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 TATDN2Q93075 761 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 ARHGEF26Q96DR7 871 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 CDHR1Q96JP9 859 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 ATP6V1G3Q96LB4 118 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 SENP7Q9BQF6 1050 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 ST6GALNAC4Q9H4F1 302 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 CYP26B1Q9NR63 512 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 CHORDC1Q9UHD1 332 aaPredicted RBP12.42□□□□□ -0.42
USP35-207ENST00000530546 NENFQ9UMX5 172 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 CSADQ9Y600 493 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 ESYT3A0FGR9 886 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 E7EVH7 732 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 KRT14P02533 472 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 EPC2Q52LR7 807 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 NOL9Q5SY16 702 aaKnown RBP12.42□□□□□ -0.42
USP35-207ENST00000530546 KCTD16Q68DU8 428 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 SLC39A4Q6P5W5 647 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
USP35-207ENST00000530546 MAP4K3Q8IVH8 894 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
USP35-207ENST00000530546 SEMA4DQ92854 862 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 ETAA1Q9NY74 926 aa12.42□□□□□ -0.42
USP35-207ENST00000530546 ZSCAN5CA6NGD5 496 aaPredicted RBP12.41□□□□□ -0.42
USP35-207ENST00000530546 BTNL10A8MVZ5 291 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 DNAJC8O75937 253 aaPredicted RBP12.41□□□□□ -0.42
USP35-207ENST00000530546 SUPT20HL2P0C7V6 817 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 POLGP54098 1239 aaPredicted RBP12.41□□□□□ -0.42
USP35-207ENST00000530546 SULF1Q8IWU6 871 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 LRRC57Q8N9N7 239 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 SLC35G2Q8TBE7 412 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 DCPSQ96C86 337 aaKnown RBP12.41□□□□□ -0.42
USP35-207ENST00000530546 IFT74Q96LB3 600 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 AGPAT1Q99943 283 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 FAM213AQ9BRX8 229 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 THAP2Q9H0W7 228 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 PPP2R3BQ9Y5P8 575 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 ZNF233A6NK53 670 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 ATP2A1O14983 1001 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 DKC1O60832 514 aaKnown RBP eCLIP12.41□□□□□ -0.42
USP35-207ENST00000530546 DGAT1O75907 488 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
USP35-207ENST00000530546 GHRP10912 638 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 ANXA13P27216 316 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
USP35-207ENST00000530546 LMBRD2Q68DH5 695 aaPredicted RBP12.41□□□□□ -0.42
USP35-207ENST00000530546 IFT20Q8IY31 132 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 RPUSD2Q8IZ73 545 aaKnown RBP12.41□□□□□ -0.42
USP35-207ENST00000530546 CLMNQ96JQ2 1002 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 AP1M1Q9BXS5 423 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms